Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028248.1
Length=136896
Score E
Sequences producing significant alignments: (Bits) Value
seq2134 87.8 2e-12
>seq2134
Length=118285
Score = 87.8 bits (96), Expect = 2e-12
Identities = 180/266 (68%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 30609 ACGACCAAAAATCTCGTCCATCAAAACTTTTAAATACGCCATTTCGCAATCATC--TAAG 30666
||| ||||||||||| |||||||| | ||||| ||| || ||| ||||| ||
Sbjct 8155 ACGCCCAAAAATCTCATCCATCAACATTTTTAGATATGCTTGTTCATTGTCATCAATACT 8096
Query 30667 TGAACGAATATTACCCCATCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTC 30726
| | |||| || |||||||| || |||||| || | ||||| || ||||| | |
Sbjct 8095 TATCCAAATACTA--CCATCATCTGCTAAAAGATTTCGTAAAATTTCCAATCTATCACGC 8038
Query 30727 ATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGTAATGCTCAAAAGCCCTCCCG 30786
||||| ||||||||| || || | || ||||| || ||| || ||
Sbjct 8037 ATTAAAGAAAGCCAAATGCTGTGTTCATATCCGTCGTCGTATTGAGGAAACGCAGAGCCA 7978
Query 30787 GTATTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGC 30846
||||| | || ||||| ||||| | ||| ||||||| ||| ||| |||| | || ||
Sbjct 7977 GTATTATACGGCGGGTCGATGTAGATACATTTCACTTGGCCGGCAAACTCGTCTTCGAGG 7918
Query 30847 GCCTTCAATGCTAATAAGTTATCTCC 30872
| || | || | || |||||| ||
Sbjct 7917 GATTTTAGGGCAAGTAGGTTATCGCC 7892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 437803482641920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |