Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq783 131 1e-25
seq2315 127 2e-24
seq242 84.2 2e-11
seq957 82.4 7e-11
>seq783
Length=580412
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| |||||||||||||| ||||| || |||||||| | ||||| || | ||
Sbjct 390129 ATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTCG 390188
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| |||| |||||| |||||||| ||||| |||||||| || || || |||
Sbjct 390189 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 390248
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || ||||| || | || ||| | || |||| |||||||||
Sbjct 390249 CAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAAC 390308
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || || || | ||| | || || | | || ||||| ||
Sbjct 390309 ATTCAGAAAGAATCTACACTCCATCTTGTGCTGAGACTTCGTGGTGGTAT 390358
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || ||||| | || ||||| ||||| || | ||
Sbjct 389901 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTCA 389960
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || ||||| || || |||||||| || || || |||
Sbjct 389961 GACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCAA 390020
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||||| || | ||||| | ||| | ||||| ||||||
Sbjct 390021 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAAC 390080
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || || || | ||| | || ||||| | || ||||| ||
Sbjct 390081 ATTCAAAAAGAATCTACACTTCATCTTGTGTTGCGACTTCGTGGTGGAAT 390130
Score = 107 bits (118), Expect = 2e-18
Identities = 139/191 (73%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| || || |||| || || ||||| ||| | ||
Sbjct 387058 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTCA 387117
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || || || |||||||||||||| || || || || || |||
Sbjct 387118 GATACCATTGAGAACGTGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCAA 387177
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | ||||| | || |||||||||||||||||| | || | || || |||||
Sbjct 387178 CAGAGATTAATCTTTGCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAAT 387237
Query 27168 ATTCA-AAAGG 27177
|| || |||||
Sbjct 387238 ATACAGAAAGG 387248
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||| ||||| | || ||| | ||||| || | ||
Sbjct 391125 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 391184
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| |||||||| || || || ||||| || || |||||
Sbjct 391185 GACACAATCGAAAATGTGAAAGCCAAAATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 391244
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || |||||| | ||||| | ||| | || || ||||||
Sbjct 391245 CAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAAC 391304
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
||||| ||||| || || | || |||||
Sbjct 391305 ATTCAGAAGGAATCCACTCTCCACTTGGT 391333
>seq2315
Length=138946
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| || || || | || || ||||| |||||||| ||
Sbjct 26778 ATGCAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATCT 26837
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || ||| |||||||||||||||||| || || || || |||||
Sbjct 26838 GATACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCAG 26897
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||| || ||||| ||||||| | || |||| || || |||
Sbjct 26898 CAGAGATTGATTTTCGCAGGGAAACAGCTGGAAGATGGACGCACACTTTCAGACTATAAC 26957
Query 27168 ATTCAAAA 27175
||||||||
Sbjct 26958 ATTCAAAA 26965
Score = 127 bits (140), Expect = 2e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || || || || | || || || || || ||||| ||
Sbjct 27520 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 27579
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| ||||||||||||||||| || ||||| |||||
Sbjct 27580 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 27639
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| ||||| | || |||||||| |||||||| || || | || || |||||
Sbjct 27640 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 27699
Query 27168 ATTCAAAAGG 27177
||||||||||
Sbjct 27700 ATTCAAAAGG 27709
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || || || ||||| | || || || || || ||||| ||
Sbjct 28022 ATGCAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCT 28081
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||||||||||||||||||||| || ||||| |||||
Sbjct 28082 GATACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAG 28141
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| ||||| | || |||||||| |||||||| || || | || || |||||
Sbjct 28142 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 28201
Query 27168 ATTCAAAA 27175
|| |||||
Sbjct 28202 ATCCAAAA 28209
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| || ||| | ||||| | ||||||||||| ||
Sbjct 32992 CATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTC 33051
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||||| || ||| ||| |||||||| || || || || || || || ||
Sbjct 33052 AGATACCATTGAGAATGTAAAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCA 33111
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || |||||||| | || || || || |||| ||||||||
Sbjct 33112 GCAGAGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCGCACACTTTCAGATTACAA 33171
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| || | ||||||||| | ||| |||| |||||
Sbjct 33172 TATTCAGAAAGAGTCTACTCTGCATTTGGTTCTCCGTCTGCGAGGTGG 33219
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||||||||| || || || || || || | || || || || || ||||| ||
Sbjct 28960 CATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATC 29019
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || || ||| ||||||||||||||||| || ||||| || ||
Sbjct 29020 TGATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCA 29079
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| ||||| | || || ||||| |||||||| | || | || || |||||
Sbjct 29080 GCAGCGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAA 29139
Query 27167 CATTCAAAAGG 27177
||||||||||
Sbjct 29140 TATTCAAAAGG 29150
>seq242
Length=1788442
Score = 84.2 bits (92), Expect = 2e-11
Identities = 134/191 (70%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || |||||| | || || || | ||||| || || || ||| | ||
Sbjct 1569777 ATGCAGATATTCGTGAAAACTTTAACGGGTAAAACAATTACCCTCGAGGTTGAAGCCTCT 1569836
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||| |||||||| |||||||| || || ||||||
Sbjct 1569837 GATACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAGGAAGGCATCCCTCCTGATCAA 1569896
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || | || | || ||||| ||
Sbjct 1569897 CAGAGATTGATTTTTGCTGGAAAGCAGCTAGAGGATGGACGAACACTCTCTGATTATAAT 1569956
Query 27168 ATTCA-AAAGG 27177
||||| |||||
Sbjct 1569957 ATTCAGAAAGG 1569967
>seq957
Length=827651
Score = 82.4 bits (90), Expect = 7e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 135430 TTACACGCGCGAGCAATGGGACCAAGCGTTGACGCATGACCCGTTGTGGAACGCGGCACA 135489
|||||| | || ||| ||| |||| | || ||||| || |||||| |||||||
Sbjct 413674 TTACACCAGAGAAGAATTGGAAAAAGCAGTCACACATGATGACTTATGGAACTCGGCACA 413733
Query 135490 ACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATGTATTGGGCAAAAAA 135549
|| ||| || |||||| |||||||| || || | |||||||||||||| || ||
Sbjct 413734 GTTACAACTTGTGCAAGAAGGAAAAATGCATGGTTTCCTACGCATGTATTGGGCCAAGAA 413793
Query 135550 GATATTGGAATGG 135562
||||||||||||
Sbjct 413794 AATATTGGAATGG 413806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434783618787840
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