Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq2029 86.0 2e-12 >seq2029 Length=231691 Score = 86.0 bits (94), Expect = 2e-12 Identities = 176/259 (68%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 |||||| |||| ||||| || | || ||||| | ||| ||| || |||| ||||| Sbjct 11783 AGAGGTATTAATAAAGTTATATTAGTCGGTAATATTGGTAATGAGCCAGAAATGCGCTAT 11724 Query 7336 ATGCCCAACGGCAATGCGGTGACCAAC-ATCACCCTCGCCACCAGCGAGAGCTGGAAGGA 7394 ||||| ||||||||||| || | |||| | | | ||||| || ||||| || Sbjct 11723 ATGCCTAACGGCAATGCAGT-AGCAACTGTTTCTTTAGCCACTTCTGACGCATGGAAAGA 11665 Query 7395 CAAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCG 7454 || | || || | ||||||||||| |||| | |||||||| || ||||| ||| Sbjct 11664 TAAAAATACTGGTGAACAACAGGAACGTACCGAATGGCACCGCGTAGTATTCTTTGGTAA 11605 Query 7455 CCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAG 7514 | || || |||| || | || ||| || ||||| || | || || |||||| | Sbjct 11604 GTTAGCTGAAATCGTTGGGCAATATGTGCATAAAGGTTCAAAGCTGTATGTAGAAGGCCG 11545 Query 7515 CCTGCGCACCCGCAAGTGG 7533 || | ||||| || ||| Sbjct 11544 TCTACAAACCCGTAAATGG 11526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194761844253424