Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 86.0 2e-12
>seq2029
Length=231691
Score = 86.0 bits (94), Expect = 2e-12
Identities = 176/259 (68%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335
|||||| |||| ||||| || | || ||||| | ||| ||| || |||| |||||
Sbjct 11783 AGAGGTATTAATAAAGTTATATTAGTCGGTAATATTGGTAATGAGCCAGAAATGCGCTAT 11724
Query 7336 ATGCCCAACGGCAATGCGGTGACCAAC-ATCACCCTCGCCACCAGCGAGAGCTGGAAGGA 7394
||||| ||||||||||| || | |||| | | | ||||| || ||||| ||
Sbjct 11723 ATGCCTAACGGCAATGCAGT-AGCAACTGTTTCTTTAGCCACTTCTGACGCATGGAAAGA 11665
Query 7395 CAAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCG 7454
|| | || || | ||||||||||| |||| | |||||||| || ||||| |||
Sbjct 11664 TAAAAATACTGGTGAACAACAGGAACGTACCGAATGGCACCGCGTAGTATTCTTTGGTAA 11605
Query 7455 CCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAG 7514
| || || |||| || | || ||| || ||||| || | || || |||||| |
Sbjct 11604 GTTAGCTGAAATCGTTGGGCAATATGTGCATAAAGGTTCAAAGCTGTATGTAGAAGGCCG 11545
Query 7515 CCTGCGCACCCGCAAGTGG 7533
|| | ||||| || |||
Sbjct 11544 TCTACAAACCCGTAAATGG 11526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194761844253424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |