Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq95 118 3e-22 >seq95 Length=1800565 Score = 118 bits (130), Expect = 3e-22 Identities = 334/510 (65%), Gaps = 11/510 (2%) Strand=Plus/Minus Query 6498 AGGCCACTTTCAAACTCACGCTCGACGATGTTGTGGGCCTGCTCGACCTGGCCCTTGGCG 6557 ||||| |||||||| | ||||| | |||| |||||| | || || || || || Sbjct 1005279 AGGCCGCTTTCAAAATTGCGCTCTATAATGTCGTGGGCTTTTTCTACTGAACCTTTAGCC 1005220 Query 6558 CGTGCGTTACCGACTTTGTTGATGATCAGTTCGATGCCCAGGGCGCGACACAGGTTGCGG 6617 | ||| || ||||| || || || | ||| |||| |||||| || ||||||||| Sbjct 1005219 CTTGCATTCTTAACTTTATTAATAATTAACGTGATACCCAAGGCGCGGCAAAGGTTGCGG 1005160 Query 6618 AACATCGAGGAGGTCATGGCCGCACCGGGGTCGGTCATGATCATGAAGGGCACGCCATGG 6677 ||||| | || ||||||| || || ||||| ||||| ||||| || || |||| Sbjct 1005159 AACATAGCAGACTTCATGGCGGCGCCTGGGTCTGTCATTATCATTTTAGGTACACCATAA 1005100 Query 6678 AACGGGTCGGTATCACCACGCTTGACCATCGCGCTGATCAGTACATGGCAGAGGTTCTCC 6737 || || | | || |||| || ||| | || | || ||| ||| | || Sbjct 1005099 AAGGGAT---ATTTGCCCCGCTGTTGGATAGCGTTAATTAAGCAATTGCAAAGGCTTTCG 1005043 Query 6738 GCGCTTTCAGCGCCGAGCACGTAATGCACGTACAGGGTACCGCTGGTGTGGTCCGTGATG 6797 ||||||||| || | | ||| | | || | || || |||||||||| || || Sbjct 1005042 GCGCTTTCACTACCTAACGAGTATTCAGCATAAATAGTGCCTGTGGTGTGGTCAGTAATT 1004983 Query 6798 ACGTAACGCCATAGGCGCTGTTTCTCGATGCGCTTGAGATTCTCTGGCTTGCCGTCGTAG 6857 | || || || ||| | || || ||||| || | || || ||||| |||||||| Sbjct 1004982 GCATAGCGTTGTAAGCGTTTCTTTTCTATGCGTTTTAAGTTTTCGGGCTTACCGTCGTAA 1004923 Query 6858 AACTCGGCC----TTATTCATGGCGCGCGCGCCGTCATTGGCCAGGTAGAACTGAGTGGA 6913 |||||| | |||| | || | ||||| || | ||| ||| |||| | | | Sbjct 1004922 TACTCGGACGGGTCTATT-TTTTCGAG---GCCGTTATCGTCCAAGTAATACTGGGCGCA 1004867 Query 6914 GATCGAGGCGTCGATCTGCCAGACGTGGTTGGGATGCAGACTGACCAACTCGACCGCTGG 6973 || |||||||| || ||||| |||||||| || || |||| | || | ||||| Sbjct 1004866 AATTGAGGCGTCTATTTGCCAAACGTGGTTCGGGTGTTCACTGGCTAAGCGGGTGGCTGG 1004807 Query 6974 GGCCGGGCGCAGTAGTTGCTCAGGGTGCAA 7003 | | | | ||| |||| ||||||||| Sbjct 1004806 TTCTGCCTGTAATAGCTGCTTAGGGTGCAA 1004777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126538735392720