Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq1535 98.7 1e-15
seq3436 87.8 2e-12
seq1690 86.0 7e-12
seq6689 82.4 9e-11
>seq1535
Length=1988416
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546
|||| | || ||||| ||||| ||||| || || ||||| | | | ||||||| |
Sbjct 223543 AAGGTGCACATCATCTGAATGTGAATGTACTCAACCGTGAGATGTTGGAAGATGCTATGG 223602
Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605
||||||| ||||||||||||||||| || ||||| || || |||||||||||| ||||
Sbjct 223603 AACATCCGGAAAAATATCCTCAACTTACGATTCGGGTATCCGGTTATGCAGTTAATTTT 223661
>seq3436
Length=2346199
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546
|||| | ||| || | ||||| ||||| || || | |||| ||| ||||||| |
Sbjct 1583847 AAGGAGCTCACCACTTAAATGTAAATGTGCTTAACAGGGAAATGCTGGAAGATGCTATGG 1583788
Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599
||||||| ||||||||||| ||||| || || |||||||| |||||||| |||
Sbjct 1583787 AACATCCCGAAAAATATCCGCAACTAACAATACGTGTTTCCGGTTATGCGGTT 1583735
>seq1690
Length=1574822
Score = 86.0 bits (94), Expect = 7e-12
Identities = 67/79 (85%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 122094 TGCGGTAGTAACTCAGTTGGTAGAGTGCCGTCCTTCCAAGTCGGATGTCGCGAGTTCGAA 122153
||||| ||| |||||| ||||||| | || | | ||||| || ||||||||||||||||
Sbjct 480167 TGCGGGAGTGGCTCAGT-GGTAGAGCGTCGCCTTGCCAAGGCGAATGTCGCGAGTTCGAA 480225
Query 122154 TCTCGTCTGCCGCTCCAAA 122172
|||||||| ||||||||||
Sbjct 480226 TCTCGTCTTCCGCTCCAAA 480244
Score = 86.0 bits (94), Expect = 7e-12
Identities = 67/79 (85%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 122093 ATGCGGTAGTAACTCAGTTGGTAGAGTGCCGTCCTTCCAAGTCGGATGTCGCGAGTTCGA 122152
|||||| ||| |||||| ||||||| | || | | ||||| || |||||||||||||||
Sbjct 1364658 ATGCGGGAGTGGCTCAGT-GGTAGAGCGTCGCCTTGCCAAGGCGAATGTCGCGAGTTCGA 1364716
Query 122153 ATCTCGTCTGCCGCTCCAA 122171
||||||||| |||||||||
Sbjct 1364717 ATCTCGTCTTCCGCTCCAA 1364735
>seq6689
Length=8825
Score = 82.4 bits (90), Expect = 9e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 122727 GGGCGTGTAGCTCAATTGGGAGAGCAACTGCTTTGCAAGCAGAAGGTTGAGGGTTCGAGT 122786
||| ||||||||||||||||||||| | ||||||||||| ||| || | |||||||| |
Sbjct 4097 GGGGGTGTAGCTCAATTGGGAGAGCGTCAGCTTTGCAAGCTGAATGTCGTGGGTTCGATT 4038
Query 122787 CCCTTCTTGTCCACCAAA 122804
|||| | |||||||||
Sbjct 4037 CCCTCCACCTCCACCAAA 4020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582555410113600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |