Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028775.1 Length=43098 Score E Sequences producing significant alignments: (Bits) Value seq6928 170 5e-38 >seq6928 Length=39225 Score = 170 bits (188), Expect = 5e-38 Identities = 284/408 (70%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 33311 ATAGCGTCTGCTAAATCAGGACCTGCCTTTGCACCAAATGCTTCAATCGCTAAACTAGTT 33370 |||||||| |||||||| || || || || || ||||||||||||||||| | ||| || Sbjct 10753 ATAGCGTCCGCTAAATCGGGGCCGGCTTTCGCTCCAAATGCTTCAATCGCCATACTGGTC 10812 Query 33371 GCGCTAGCTATATCCGGCGTCTTTTCAATTT-CTGCTAATGTCTTCTTAAATTCTTCTCT 33429 || | || |||||||||| | | || | |||| | ||| || |||||| | || Sbjct 10813 GCTGTTGCAATATCCGGCGCATCCTTGATCTGCTGC-ATTGTTTTTCCGAATTCTACACT 10871 Query 33430 TGGGTTTTTACCAGCTTTACCCCAATTTGATATAGCTTTTTTCAAACCACTGAATGCTAT 33489 | || ||| ||||| ||||| || || || || ||||||| || |||||||| || Sbjct 10872 CGCGTCTTTTCCAGCGGCTCCCCAGTTGGAAATTGCCTTTTTCATCCCGCTGAATGCAAT 10931 Query 33490 TTCAGTATTAACGCCTGACTTTTCCCATTGAGAGAATAAAGCAATTGATTCTTTCATCTC 33549 ||||||||||| || | ||||||||| | || | |||||||| || | | || Sbjct 10932 CTCAGTATTAACACCCGCTTTTTCCCATCCGGCAAACATCGCAATTGAAGTTTGCGTATC 10991 Query 33550 AAAGCCCATAGCTCTCATTGGAGCGCCGTATTTAGTAATACTATCAGCTAATGTGTCAAC 33609 || || | || | ||| || ||||| ||||| | | | | | | ||||| |||| Sbjct 10992 AAGCCCAAGCGCACGCATAGGCGCGCCATATTTCGCCAGATTTCCGGTTAATGAATCAAT 11051 Query 33610 ACTTATCCCACTAGCTTGCGCCGCTTTTGCTACCATATCCAAAACACTTTGATATTCACT 33669 | ||| || |||||||||| | | ||||||||| ||| | ||||||| | Sbjct 11052 TGAAACCCCGCTCTTTTGCGCCGCTACGGTCAGCATATCCAAGACAGTACCATATTCATT 11111 Query 33670 TGCTTCGATACCTGCATCGCCCATTGCACGGGTAATTAACTGTACGGC 33717 || | || | ||||| ||||| |||||||||| | |||||| || Sbjct 11112 GGCATTAATCTCAGCATCCCCCATAGCACGGGTAACAAGCTGTACCGC 11159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137751433346240