Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028834.1
Length=48216
Score E
Sequences producing significant alignments: (Bits) Value
seq3436 98.7 3e-16
seq1094 98.7 3e-16
seq875 98.7 3e-16
seq2146 96.9 1e-15
seq179 91.5 5e-14
seq2694 89.7 2e-13
seq1702 89.7 2e-13
seq126 86.0 2e-12
seq5589 84.2 7e-12
seq2787 84.2 7e-12
>seq3436
Length=2346199
Score = 98.7 bits (108), Expect = 3e-16
Identities = 71/81 (88%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 36267 TTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-G 36325
||| ||||| |||| ||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct 2131316 TTTCGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 2131375
Query 36326 CCAGACTGCGCTACACTCCGA 36346
|| ||||||||||||| ||||
Sbjct 2131376 CCGGACTGCGCTACACCCCGA 2131396
>seq1094
Length=2708314
Score = 98.7 bits (108), Expect = 3e-16
Identities = 70/79 (89%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || |
Sbjct 981877 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 981936
Query 36330 ACTGCGCTACACTCCGAAA 36348
|||||||||||| ||||||
Sbjct 981937 ACTGCGCTACACCCCGAAA 981955
Score = 93.3 bits (102), Expect = 1e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || |
Sbjct 981983 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 982042
Query 36330 ACTGCGCTACACTCCG 36345
|||||||||||| |||
Sbjct 982043 ACTGCGCTACACCCCG 982058
>seq875
Length=1099013
Score = 98.7 bits (108), Expect = 3e-16
Identities = 73/84 (87%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 36265 TTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT 36324
|| || ||||| |||| ||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct 1090754 TTCTTTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCT 1090813
Query 36325 -GCCAGACTGCGCTACACTCCGAA 36347
|| ||||||||||||| |||||
Sbjct 1090814 AACCGGACTGCGCTACACCCCGAA 1090837
>seq2146
Length=1104199
Score = 96.9 bits (106), Expect = 1e-15
Identities = 72/83 (87%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 36265 TTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT 36324
|| || ||||| |||| ||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct 823377 TTCTTTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCT 823436
Query 36325 -GCCAGACTGCGCTACACTCCGA 36346
||| | ||||||||||| ||||
Sbjct 823437 AGCCGGGCTGCGCTACACCCCGA 823459
>seq179
Length=2312354
Score = 91.5 bits (100), Expect = 5e-14
Identities = 72/85 (85%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 36264 ATTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGC 36323
|||||| ||||| || ||||||||||||| ||||| ||||||||||||||| |||||
Sbjct 479346 ATTTTTCGTCGGGGTGGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGC 479405
Query 36324 T-GCCAGACTGCGCTACACTCCGAA 36347
| || ||||||||||||| |||||
Sbjct 479406 TAACCGGACTGCGCTACACCCCGAA 479430
>seq2694
Length=83261
Score = 89.7 bits (98), Expect = 2e-13
Identities = 72/86 (84%), Gaps = 1/86 (1%)
Strand=Plus/Minus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
|||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || |
Sbjct 48476 GTCGAGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 48417
Query 36330 ACTGCGCTACACTCCGAAAACCTGCG 36355
|||||||||||| ||| || ||||
Sbjct 48416 ACTGCGCTACACCTCGATTACATGCG 48391
>seq1702
Length=707479
Score = 89.7 bits (98), Expect = 2e-13
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 36266 TTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT- 36324
|||| ||||| ||| ||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct 411509 TTTTAGTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTA 411568
Query 36325 GCCAGACTGCGCTACA 36340
|| ||||||||||||
Sbjct 411569 ACCGGACTGCGCTACA 411584
>seq126
Length=3533043
Score = 86.0 bits (94), Expect = 2e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
|||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| ||| |
Sbjct 242690 GTCGAGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAGCCGG 242631
Query 36330 ACTGCGCTACAC 36341
|||||||||||
Sbjct 242630 GCTGCGCTACAC 242619
>seq5589
Length=13581
Score = 84.2 bits (92), Expect = 7e-12
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||| || |
Sbjct 7309 GTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 7368
Query 36330 ACTGCGCTACA 36340
|||||||||||
Sbjct 7369 ACTGCGCTACA 7379
>seq2787
Length=1710943
Score = 84.2 bits (92), Expect = 7e-12
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329
||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||| || |
Sbjct 1180844 GTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 1180903
Query 36330 ACTGCGCTACA 36340
|||||||||||
Sbjct 1180904 ACTGCGCTACA 1180914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154124211698912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |