Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028834.1 Length=48216 Score E Sequences producing significant alignments: (Bits) Value seq3436 98.7 3e-16 seq1094 98.7 3e-16 seq875 98.7 3e-16 seq2146 96.9 1e-15 seq179 91.5 5e-14 seq2694 89.7 2e-13 seq1702 89.7 2e-13 seq126 86.0 2e-12 seq5589 84.2 7e-12 seq2787 84.2 7e-12 >seq3436 Length=2346199 Score = 98.7 bits (108), Expect = 3e-16 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 36267 TTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-G 36325 ||| ||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| Sbjct 2131316 TTTCGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAA 2131375 Query 36326 CCAGACTGCGCTACACTCCGA 36346 || ||||||||||||| |||| Sbjct 2131376 CCGGACTGCGCTACACCCCGA 2131396 >seq1094 Length=2708314 Score = 98.7 bits (108), Expect = 3e-16 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || | Sbjct 981877 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 981936 Query 36330 ACTGCGCTACACTCCGAAA 36348 |||||||||||| |||||| Sbjct 981937 ACTGCGCTACACCCCGAAA 981955 Score = 93.3 bits (102), Expect = 1e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || | Sbjct 981983 GTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 982042 Query 36330 ACTGCGCTACACTCCG 36345 |||||||||||| ||| Sbjct 982043 ACTGCGCTACACCCCG 982058 >seq875 Length=1099013 Score = 98.7 bits (108), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 36265 TTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT 36324 || || ||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| Sbjct 1090754 TTCTTTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCT 1090813 Query 36325 -GCCAGACTGCGCTACACTCCGAA 36347 || ||||||||||||| ||||| Sbjct 1090814 AACCGGACTGCGCTACACCCCGAA 1090837 >seq2146 Length=1104199 Score = 96.9 bits (106), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 36265 TTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT 36324 || || ||||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| Sbjct 823377 TTCTTTGTCGGGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCT 823436 Query 36325 -GCCAGACTGCGCTACACTCCGA 36346 ||| | ||||||||||| |||| Sbjct 823437 AGCCGGGCTGCGCTACACCCCGA 823459 >seq179 Length=2312354 Score = 91.5 bits (100), Expect = 5e-14 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 36264 ATTTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGC 36323 |||||| ||||| || ||||||||||||| ||||| ||||||||||||||| ||||| Sbjct 479346 ATTTTTCGTCGGGGTGGCAGGATTCGAACCTGCGACCCCCTGCTCCCAAAGCAGGTGCGC 479405 Query 36324 T-GCCAGACTGCGCTACACTCCGAA 36347 | || ||||||||||||| ||||| Sbjct 479406 TAACCGGACTGCGCTACACCCCGAA 479430 >seq2694 Length=83261 Score = 89.7 bits (98), Expect = 2e-13 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 |||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| || | Sbjct 48476 GTCGAGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 48417 Query 36330 ACTGCGCTACACTCCGAAAACCTGCG 36355 |||||||||||| ||| || |||| Sbjct 48416 ACTGCGCTACACCTCGATTACATGCG 48391 >seq1702 Length=707479 Score = 89.7 bits (98), Expect = 2e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 36266 TTTTGGTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT- 36324 |||| ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||| Sbjct 411509 TTTTAGTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTA 411568 Query 36325 GCCAGACTGCGCTACA 36340 || |||||||||||| Sbjct 411569 ACCGGACTGCGCTACA 411584 >seq126 Length=3533043 Score = 86.0 bits (94), Expect = 2e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 |||| |||| ||||||||||||| |||||| ||||||||||||||| |||||| ||| | Sbjct 242690 GTCGAGGTACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAGCCGG 242631 Query 36330 ACTGCGCTACAC 36341 ||||||||||| Sbjct 242630 GCTGCGCTACAC 242619 >seq5589 Length=13581 Score = 84.2 bits (92), Expect = 7e-12 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||| || | Sbjct 7309 GTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 7368 Query 36330 ACTGCGCTACA 36340 ||||||||||| Sbjct 7369 ACTGCGCTACA 7379 >seq2787 Length=1710943 Score = 84.2 bits (92), Expect = 7e-12 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 36271 GTCGGAGTACTAGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCT-GCCAG 36329 ||||| ||| ||||||||||||| |||||| ||||||||||||||| |||||| || | Sbjct 1180844 GTCGGGATACCAGGATTCGAACCTGGGACCCCCTGCTCCCAAAGCAGGTGCGCTAACCGG 1180903 Query 36330 ACTGCGCTACA 36340 ||||||||||| Sbjct 1180904 ACTGCGCTACA 1180914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154124211698912