Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq1659 113 1e-20
seq2745 80.6 9e-11
>seq1659
Length=254437
Score = 113 bits (124), Expect = 1e-20
Identities = 205/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057
||| |||| |||||| || ||| | ||| ||||| ||||| || || ||||||| |
Sbjct 98509 CCGAACGTAATGATCTGGGCAACCCGCTTACTCCCGTATTTCTCAGTAACATACCGGAGC 98568
Query 39058 ACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCA 39117
|||||| | || | || ||||| |||||||| | ||||| | |||| ||| ||
Sbjct 98569 ACGTCGGCGCGTCCGTCCTCGTCGAAATCGATGTCGATATCGGGAAGCGAGATACGGTCG 98628
Query 39118 GGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCG 39177
|| || ||||| |||||||| | || ||| ||| ||||| | | || ||||||
Sbjct 98629 GGATTGAGGAAACGCTCGAAAAGCAGGTCGTATTTGATCGGGTCGATATTAGTTATCCCG 98688
Query 39178 AGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCG 39237
|||||||| || | | ||| || || || || ||||| || || || || ||| ||
Sbjct 98689 AGGGCGTATGCCACGACCGACCCGGCGGCCGAACCGCGTCCCGGTCCCACAGCCACTCCC 98748
Query 39238 TTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATC 39297
||||| | || | ||| || || || | |||||||| ||| ||||||||
Sbjct 98749 ATCTCCCTACCCGCACGGATAAAATCCCACACTATCAGGAAGTAGCCCGGATACCCCATC 98808
>seq2745
Length=54617
Score = 80.6 bits (88), Expect = 9e-11
Identities = 161/239 (67%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 39082 AAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATG 39141
||||||||||| | ||| |||||||| || || || || || ||||| || ||||| |
Sbjct 47074 AAGTCGATGTCAAAGTCCGGCATGGAAACGCGTTCCGGATTAAGGAAACGTTCGAACAGC 47015
Query 39142 AGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCA 39201
|| | | | || | || |||||||| || || | || | | ||| ||
Sbjct 47014 AGGTTGAACTGCAGCGGATTAAGATCGGTGATAAAAAGCGCCCAGGCAACGACCGAACCG 46955
Query 39202 GCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAG 39261
|| | || ||||| || || ||||| | || || |||||||| ||| |||
Sbjct 46954 GCACCTGATCCGCGTCCCGGACCGACAGGAATTCCTTTGGATTTCGCCCACTGGATAAAG 46895
Query 39262 TCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTA 39320
||||| |||| || ||||| ||| || ||||||||| |||| | |||||| || ||
Sbjct 46894 TCGGCAACGATCAGAAAGTATCCCGGAAATCCCATCTGGATGATAACGTCGATTTCATA 46836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159668179046544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |