Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq1070 158 6e-34 >seq1070 Length=478823 Score = 158 bits (174), Expect = 6e-34 Identities = 530/810 (65%), Gaps = 29/810 (4%) Strand=Plus/Plus Query 66458 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTAC 66517 |||| || |||||| | || || ||| || |||| || ||||| | || || || Sbjct 111690 GTGGCGGTAATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATAT 111749 Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577 |||| ||| |||| || ||||| |||||||| || ||||| || || | || ||| Sbjct 111750 CCGAAGGGTAGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGCC 111809 Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637 || || || | || | |||||||| || || || | ||| || | ||| || || || Sbjct 111810 CTGCATGCAATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGAA 111869 Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697 ||| | | || | || ||| || || || || || |||||||||| | | Sbjct 111870 CACGCTTTCGATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTATA 111929 Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCT--G 66755 | || || || | ||| || ||||| ||||| || | || ||| ||| |||| | Sbjct 111930 GCGCAACCAGACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTCG 111989 Query 66756 GCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66815 |||| | || || || | ||||| || || || || ||| ||||| ||| Sbjct 111990 GCGATAGAT--ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATCG 112047 Query 66816 AAGGCGACATCGGGGACAGTC--ACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCAT 66873 | ||||| || |||| |||| | | ||||| || ||| | |||||||| ||||| | Sbjct 112048 AGGGCGATAT--GGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCATT 112105 Query 66874 GCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTT 66933 ||| || | || || | |||| | ||||| ||| | | | |||| ||||| Sbjct 112106 GCGTAAATTAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGTT 112165 Query 66934 GCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACGGGCGGAAA 66990 |||||| |||||||| || | ||||| |||| || || || || || || || Sbjct 112166 GCGCGACAAGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTAA 112219 Query 66991 GGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCG--TCGCATCGCCACCGAGAAG 67048 || |||| ||| ||||| || || || ||| |||| || ||| | ||| Sbjct 112220 TGCATTGAAGTTTTACGCAAGTGTACGCATAGATATCCGAAAAGCGTCG--AGTATCAAG 112277 Query 67049 GAAGGCGATGAGGCTG-TCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGC 67107 || ||||| | | | |||| | || | ||| || || || |||||||| |||| Sbjct 112278 GACGGCGA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGGC 112336 Query 67108 CCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG-CGTGAGG 67166 |||||| ||| || ||||||||| | | ||||||| ||||| || ||| | ||| Sbjct 112337 CCCGCCTTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTCGAAGATAGG 112396 Query 67167 TCGAACTCCTCGACCTGGCCGTGTCG--CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 67224 ||| || | ||||| | |||||| | | | | | |||||| ||| | ||||| Sbjct 112397 -CGAGATCATAGACCTTG--GTGTCGACCTGAACGTAATAAAGAAGAGCGGCTCTTGGTT 112453 Query 67225 CAAGTACGGGGACAAGAACGTCGCCCAGGG 67254 | ||||||||| | ||| | | |||||| Sbjct 112454 CTCGTACGGGGAAATGAAATTGGGCCAGGG 112483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242787419002128