Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq1659 105 2e-18 >seq1659 Length=254437 Score = 105 bits (116), Expect = 2e-18 Identities = 207/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 39425 ATCCTGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTAC 39484 ||| ||||| |||| |||||| || ||| | || ||||| ||||| || || ||| Sbjct 98503 ATCGTGCCGAACGTAATGATCTGGGCAACCCGCTTACTCCCGTATTTCTCAGTAACATAC 98562 Query 39485 CGGATCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACG 39544 |||| ||||||| | || | || ||||| |||||||| | ||||| | |||| Sbjct 98563 CGGAGCACGTCGGCGCGTCCGTCCTCGTCGAAATCGATGTCGATATCGGGAAGCGAGATA 98622 Query 39545 CGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTG 39604 || || || || ||||| |||||||| | || ||| ||| ||||| | | || Sbjct 98623 CGGTCGGGATTGAGGAAACGCTCGAAAAGCAGGTCGTATTTGATCGGGTCGATATTAGTT 98682 Query 39605 ATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCAC 39664 |||||||||||||| || | | ||| || || || || || || || || || || | Sbjct 98683 ATCCCGAGGGCGTATGCCACGACCGACCCGGCGGCCGAACCGCGTCCCGGTCCCACAGCC 98742 Query 39665 ACACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAAC 39724 || || ||||| | || | ||| || || || | |||||||| ||| || Sbjct 98743 ACTCCCATCTCCCTACCCGCACGGATAAAATCCCACACTATCAGGAAGTAGCCCGGATAC 98802 Query 39725 CCCATC 39730 |||||| Sbjct 98803 CCCATC 98808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160192824542800