Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_029002.1 Length=169223 Score E Sequences producing significant alignments: (Bits) Value seq1164 89.7 6e-13 >seq1164 Length=549247 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 32885 CCATTCCCAGACGTTGCCGTACATATCGTACAGTCCCCAGGCATTAGGTAATTTTTGTCC 32944 |||||| | | || || |||||||| || |||||||| | ||| | | |||| ||| Sbjct 289895 CCATTCTGACATATTACCATACATATCATAAAGTCCCCACGAATTTGCTTTTTTTGTTCC 289836 Query 32945 TACAGGATGAGTT-GTCTTCTGAGAATTTCCTTCATACCAGGCGTAATCTACTAACTGAC 33003 ||| ||| ||| |||| || | |||| |||||||||||| || || | || | Sbjct 289835 TACTTTATGTGTTTGTCTGTTGCTATTTTC-TTCATACCAGGCATATTCATCCAATTCTG 289777 Query 33004 TAGCATCATCACCGAAATAAAACTGAGTAGTAGTCCCCGCGCGACAGGCATATTCCCATT 33063 || ||||| || || || | | || || || || || || |||||||||||||||| Sbjct 289776 CAGGGTCATCCCCAAACGAATAAAGGGTTGTTGTTCCTGCTCGGCAGGCATATTCCCATT 289717 Query 33064 CAGCCTCCGTTGG 33076 | |||||||| || Sbjct 289716 CTGCCTCCGTAGG 289704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541217824602560