Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_029044.1
Length=154434
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 87.8 2e-12
seq1885 87.8 2e-12
seq5385 84.2 2e-11
seq1094 84.2 2e-11
seq7088 82.4 8e-11
seq2884 82.4 8e-11
seq2342 82.4 8e-11
seq1659 82.4 8e-11
>seq2787
Length=1710943
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 95741 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 95800
||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 516232 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 516173
Query 95801 AACCCGTTCTTCGCTC 95816
| ||||| |||||||
Sbjct 516172 ATCCCGTCTTTCGCTC 516157
Score = 86.0 bits (94), Expect = 6e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 95742 TGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 95801
|||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| |
Sbjct 253217 TGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAA 253158
Query 95802 ACCCGTTCTTCGCTC 95816
||||| |||||||
Sbjct 253157 TCCCGTCTTTCGCTC 253143
>seq1885
Length=148911
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 95741 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 95800
||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 88486 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 88545
Query 95801 AACCCGTTCTTCGCTC 95816
| ||||| |||||||
Sbjct 88546 ATCCCGTCTTTCGCTC 88561
>seq5385
Length=39409
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 95742 TGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 95801
|||||| |||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 3215 TGCGAAAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAG 3156
Query 95802 ACCCGTTCTTCGCTCT 95817
|||||| ||||||||
Sbjct 3155 TCCCGTTTTTCGCTCT 3140
>seq1094
Length=2708314
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 95743 GCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTAA 95802
||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| |
Sbjct 1617478 GCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAAT 1617419
Query 95803 CCCGTTCTTCGCTC 95816
||||| |||||||
Sbjct 1617418 CCCGTCTTTCGCTC 1617405
>seq7088
Length=425276
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 92304 GTAGCGGTGTAGAGCAGCTAGGTAGCTCGCCGGGCTCATAACCCGGAGGACGCGTGTTCG 92363
|| |||| ||||||||||| ||||||||| ||||||||||||||||||| ||| |||||
Sbjct 185437 GTCGCGGGGTAGAGCAGCT-GGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCG 185495
Query 92364 AATCACGCCACCGCCAC 92380
|||| | | |||| ||
Sbjct 185496 AATCCTGTCCCCGCAAC 185512
>seq2884
Length=40100
Score = 82.4 bits (90), Expect = 8e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 90722 ACGGGGTGTAGTTCAG-TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 90780
|||||| |||| ||| ||| || ||||||| ||||||| ||||||| |||||||||||
Sbjct 19825 ACGGGGCGTAGCGCAGGTGGTAGCGCGCTTGCTTTGGGAGCAAGATGCCGCAGGTTCGAG 19884
Query 90781 TCCTGTCACCCCGAC 90795
||||||| |||||||
Sbjct 19885 TCCTGTCGCCCCGAC 19899
>seq2342
Length=1184292
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 113101 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 113160
|| |||||||||||||| |||| || ||| ||| ||||| |||| || ||||
Sbjct 773164 GGACCGGGCCGTGGCTCGGCCGCAGGTTCGGCGGTTGCCTACTGTTTGGGTATTACCTTA 773105
Query 113161 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCG 113213
|| |||||||| ||||||||| || |||| ||||| ||| | ||||| || ||
Sbjct 773104 ATTGACCCGATTAAGTACGACTTGCTGTTTGAGCGTTTTTTGAACCCAGATCG 773052
>seq1659
Length=254437
Score = 82.4 bits (90), Expect = 8e-11
Identities = 114/155 (74%), Gaps = 5/155 (3%)
Strand=Plus/Minus
Query 113092 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 113151
|| ||||| || ||||| || || || |||| || ||| | || | |||| | | ||
Sbjct 98743 TGGCTGTG-GGACCGGGACGCGGTTCGGCCGCCGGGTCGGTCGTGGCATACGCCCTCGGG 98685
Query 113152 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGAC 113211
|| || |||||||||||||| ||||||||| | |||||||| || |||| || |||
Sbjct 98684 ATAACTAATATCGACCCGATCAAATACGACCTGCTTTTCGAGCGTTTCCTCAATCCCGAC 98625
Query 113212 CG--CCCCGACTTCCCCGACATCGACGTCGACTTC 113244
|| | || ||| ||||| |||||| |||| |||
Sbjct 98624 CGTATCTCG-CTT-CCCGATATCGACATCGATTTC 98592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 493907690558080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |