Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq3213 145 7e-30
seq3211 114 1e-20
>seq3213
Length=2170589
Score = 145 bits (160), Expect = 7e-30
Identities = 193/264 (73%), Gaps = 8/264 (3%)
Strand=Plus/Minus
Query 36725 TTTAATCCTTATGCAAGATCACATGCTGGTGCAATGGGATTAATGCAATTGATGCCGGGA 36784
||||||||| | |||| ||| || || |||||||||||||| |||||||||||||||| |
Sbjct 1084133 TTTAATCCTAAAGCAAAATCGCACGCAGGTGCAATGGGATTGATGCAATTGATGCCGGCA 1084074
Query 36785 ACAGCTAGAAGTTTAGGTGTGACTAATGCATATGACCCATATCAAAATATCATGGGTGGT 36844
||||| | | ||||||| || ||| |||| ||| | || |||||| | || |||
Sbjct 1084073 ACAGCAAAAGGTTTAGGGGTAACTGATGCTTATAATCCTGTTCAAAACGTAGATGGCGGT 1084014
Query 36845 ACAAAATATCT-CGCTCAACAATTAAAACGATTTGGCGGAAGTATTGAAA---AAGCACT 36900
| |||| | |||| |||| | || | || ||| || || ||| ||
Sbjct 1084013 GTCAGATATTTAAAATCAATGCTTAACA-AATATAACG---GTAATGTAATTTTAGCGCT 1083958
Query 36901 TGCCGCATATAATGCAGGCCCCGGTAATGTAATAAAATATGGCGGTATTCCACCATTTAA 36960
||| || || |||||||| |||||| ||| ||||||| |||| ||||||| | |||
Sbjct 1083957 TGCAGCTTACAATGCAGGTCCCGGTGCTGTCGACAAATATGACGGTGTTCCACCTTATAA 1083898
Query 36961 AGAAACGCAAAATTATGTAAGAAG 36984
|||||| ||||||||||| |||||
Sbjct 1083897 AGAAACACAAAATTATGTCAGAAG 1083874
>seq3211
Length=33002
Score = 114 bits (126), Expect = 1e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 112479 GTAAAAGGTTGACTTGCCGTTAATACGATAGCACCATTATCTTTAATAATTCTTTTATAT 112538
||||| || ||| ||| || |||| || || |||| ||||||||||| |||||||||
Sbjct 23483 GTAAATGGCTGAGATGCGGTCAATATAATTGCGGCATTGTCTTTAATAATCCTTTTATAT 23542
Query 112539 TGTTTCCATAATTCATCTAGTGGAATTAATGTGTCCCATTTACATTCAGTAGTCCCGTAT 112598
|| | ||||| || ||| | ||| |||| | | ||||||| ||| || || || |||
Sbjct 23543 TGATGCCATAGTTTATCAATTGGTATTATTTTATCCCATTCACAACTTGTCGTGCCATAT 23602
Query 112599 GGAAGATCGCATAAAATCATGTCAATTGATTTATCTGGAAT 112639
|| | ||||||||| || | || ||||||||||| |||||
Sbjct 23603 GGTAAATCGCATAAGATTAAATCTATTGATTTATCAGGAAT 23643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451885517266560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |