Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq95 154 6e-33 >seq95 Length=1800565 Score = 154 bits (170), Expect = 6e-33 Identities = 161/202 (80%), Gaps = 11/202 (5%) Strand=Plus/Minus Query 16850 GTGCTCAAAACACCTTAGCAAGTAGCGGTTACCGCGCCCGACAGACATGCGGtttttttG 16909 ||||||||||||| | | | ||||||| ||||| ||||| || ||||||| ||||| Sbjct 66510 GTGCTCAAAACACTT---CTAATAGCGGTAACCGC-CCCGAAAGT-ATGCGGTATTTTTT 66456 Query 16910 TGTCCAGTCTTCTTGGTTTATGACCGGGCGTGCGGCTAATACAATACC-AGCAAT-GGGA 16967 ||| || | || | |||| |||| ||| ||||||||||||||| |||||| |||| Sbjct 66455 TGTT--GT-TAATTTTTATATGTTCGGGTGTGAGGCTAATACAATACCTAGCAATAGGGA 66399 Query 16968 ATATGCCCGCCGACTACTTGCGGTTTTGAGCGCCCGGTCACCCTCTC-AAAAGGGGTAAA 17026 |||||||||||| ||| | |||||||||||| |||| ||||||||| ||||||| ||| Sbjct 66398 ATATGCCCGCCGTCTATTAGCGGTTTTGAGCACCCGTCCACCCTCTCAAAAAGGGTTAAT 66339 Query 17027 TCAAAATATCAAGTAGGACACA 17048 |||||||| | | ||||| ||| Sbjct 66338 TCAAAATAGCTAATAGGAAACA 66317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194621085705648