Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq495 84.2 2e-11 >seq495 Length=1347633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118326 AGCCATCTGCATGTGTATGGTGGGAGCATGTTTGTAGTTTTCCAAAATAAAATCTTCAAA 118385 |||||||| ||| | || | ||| | ||||| ||||| || |||||||||||| Sbjct 711309 AGCCATCTCCATTTCAATTTTTGGATGTGGGTTGTAATTTTCTAATTCAAAATCTTCAAA 711368 Query 118386 CTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGAAACGGGAGAGG 118445 |||||| |||||||| |||| | ||| | || || | ||| ||||| || |||| Sbjct 711369 CTTAAAATCTTCTATGTTTTGAACATCTCTCTTGATATGCAATGTTGGAAAAGGTCGAGG 711428 Query 118446 CTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCC 118505 | | | | | ||| | ||||| || || | ||||| | ||| | ||| ||| || Sbjct 711429 TTTGCGTTTCACTTGTATTTTCAATGCTTCCACATGATTAAGATAAATGTGACTATCTCC 711488 Query 118506 AATTGTATGTATGAATTCACCAGG 118529 || ||||| | ||||||||||| Sbjct 711489 AAGAGTATGGACAAATTCACCAGG 711512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414351564798688