Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 87.8 2e-12
>seq2315
Length=138946
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||||||| || || |||||| || ||||| ||||| | |||||| || | || ||
Sbjct 33201 ACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAAAGTGTGCGACCATCCTCG 33142
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||||||||| ||||| || || | ||||||||| | || | | ||| || | | ||
Sbjct 33141 AGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGGATTCCCTCCTTAT-CTTG 33083
Query 39196 ATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
| | | || ||| | || | | ||||| | ||||| |||| || || | ||
Sbjct 33082 AATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCACTTCCAATGTAATTGTCTT 33023
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| |||| || || |||||||| |||||
Sbjct 33022 TCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429415811723096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |