Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq783 123 2e-23
seq2315 118 7e-22
seq1551 84.2 1e-11
>seq783
Length=580412
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || || || || || || ||||| |||||||| |||||||| || |
Sbjct 389900 AATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTC 389959
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | |||| | ||| || ||| || || ||||| | || ||||| ||
Sbjct 389960 AGACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCA 390019
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || ||||||||||| || || ||||| | ||| || | ||| |||||
Sbjct 390020 ACAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAA 390079
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
||| |||||||| || ||| | ||| | || ||
Sbjct 390080 CATTCAAAAAGAATCTACACTTCATCTTGTGTT 390112
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || || ||||| ||||| || |||||||| | |
Sbjct 387058 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTCA 387117
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || || ||| |||||||| || | || ||||| |||
Sbjct 387118 GATACCATTGAGAACGTGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCAA 387177
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | ||||| ||||| ||||||||| ||||||||| | | || | || |||||
Sbjct 387178 CAGAGATTAATCTTTGCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAAT 387237
Query 23791 ATACAAAAAG 23800
||||| ||||
Sbjct 387238 ATACAGAAAG 387247
Score = 107 bits (118), Expect = 1e-18
Identities = 149/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| || ||||| || || || ||||| || ||| | ||||| || | |
Sbjct 390128 AATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTC 390187
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||| || | || ||| | ||| | |||||| ||||| ||||| | || ||||| |
Sbjct 390188 GGATACGATCGAGAATGTCAAAGC-CAAAATTCAGGACAAGGAAGGCATTCCCCCAGACC 390246
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
||||| | || || ||||| ||||| || || || |||| || ||| | |||||||
Sbjct 390247 AACAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACA 390306
Query 23789 ACATACAAAAAGAGTCCACATTACAT 23814
|||| || ||||| || ||| | |||
Sbjct 390307 ACATTCAGAAAGAATCTACACTCCAT 390332
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| |||||| | |||||||| | |
Sbjct 391125 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 391184
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | ||| |||||| || || || || | || ||||||||
Sbjct 391185 GACACAATCGAAAATGTGAAAGCCAAAATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 391244
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| || |||||||| ||||| | ||| || | || ||||||
Sbjct 391245 CAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAAC 391304
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || |||||
Sbjct 391305 ATTCAGAAGGAATCCAC 391321
Score = 95.1 bits (104), Expect = 8e-15
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || ||||| |||||| | ||||| || | |
Sbjct 390357 ATGCAGATTTTCGTGAAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCA 390416
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | ||| || ||| ||||| ||||| | || ||||| |||
Sbjct 390417 GACACGATCGAAAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 390476
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| ||||| || || || || | | | ||| | || |||||
Sbjct 390477 CAGAGATTGATCTTTGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAAT 390536
Query 23791 ATACAAAAAG 23800
|| || ||||
Sbjct 390537 ATTCAGAAAG 390546
>seq2315
Length=138946
Score = 118 bits (130), Expect = 7e-22
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| || ||||| ||||| || || || || | |
Sbjct 28022 ATGCAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCT 28081
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||||| |||| ||||||| ||||||||||| | || ||||||||
Sbjct 28082 GATACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAG 28141
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| ||||| ||||| |||||||| ||||||| | ||||| | || |||||
Sbjct 28142 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 28201
Query 23791 ATACAAAAAG 23800
|| |||||||
Sbjct 28202 ATCCAAAAAG 28211
Score = 114 bits (126), Expect = 9e-21
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| |||||||| ||||| || || || || | |
Sbjct 27520 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 27579
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||||| |||| ||| ||| ||||||||||| | || ||||||||
Sbjct 27580 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 27639
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| ||||| ||||| |||||||| ||||||| | ||||| | || |||||
Sbjct 27640 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 27699
Query 23791 ATACAAAA 23798
|| |||||
Sbjct 27700 ATTCAAAA 27707
Score = 105 bits (116), Expect = 5e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || |||||||| |||||||| ||||| || || || || | |
Sbjct 28961 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 29020
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||||| |||| ||| ||| ||||||||||| | || ||||| ||
Sbjct 29021 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAG 29080
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| ||||| ||||| || ||||| ||||||| | ||||| | || |||||
Sbjct 29081 CAGCGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAAT 29140
Query 23791 ATACAAAA 23798
|| |||||
Sbjct 29141 ATTCAAAA 29148
Score = 95.1 bits (104), Expect = 8e-15
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||| || || || ||||| || || || || || || | |
Sbjct 26778 ATGCAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATCT 26837
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | ||||| ||||||| |||||||| || | || || |||||
Sbjct 26838 GATACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCAG 26897
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || || || || ||||| |||||||| | |||||| | || || |||
Sbjct 26898 CAGAGATTGATTTTCGCAGGGAAACAGCTGGAAGATGGACGCACACTTTCAGACTATAAC 26957
Query 23791 ATACAAAAAG 23800
|| |||||||
Sbjct 26958 ATTCAAAAAG 26967
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || |||||||| || | || |||||||| ||||| | ||||| || | |
Sbjct 27130 AATGCAAATCTTCGTTAAGACTTTGACTGGAAAAACTATCACCTTGGAAGTGGAACCATC 27189
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||||| ||||| ||| || ||||| |||||| | || || |||||
Sbjct 27190 TGATACAATTGAAAATGTAAAAGCAAAGATACAAGACAAGGAAGGTATTCCTCCTGATCA 27249
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || ||||| || || || ||||| || | ||||| | ||||||||
Sbjct 27250 GCAAAGACTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCTGATTACAA 27309
Query 23790 CATACAAAAAG 23800
|||||||||||
Sbjct 27310 CATACAAAAAG 27320
>seq1551
Length=444118
Score = 84.2 bits (92), Expect = 1e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| |||||| | |||||||| | |
Sbjct 25339 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 25280
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| ||||| ||||| || || | || |||| ||||||||
Sbjct 25279 GACACAATCGAAAATGTAAAAGCCAAAATCCAGGATAAGGCGGGCATACCTCCAGATCAG 25220
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACT 23759
|||||| | || ||||| || ||||||||
Sbjct 25219 CAGCGTCTTATCTTTGCTGGTAAACAACT 25191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337907469554336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |