Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq714 156 4e-33
>seq714
Length=734366
Score = 156 bits (172), Expect = 4e-33
Identities = 169/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867
||| ||| |||||| || ||||| ||||| || |||||||| ||||| | |||||| ||
Sbjct 47746 TGGATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCAT 47805
Query 4868 AGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCT 4927
||||| ||||| || || || ||||| |||||||| ||||| ||||| | | |||||
Sbjct 47806 TGCAATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCT 47865
Query 4928 TTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGA 4987
|||||| | |||||| ||||| || || || |||||||| || || | || || ||
Sbjct 47866 TTCTACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGA 47925
Query 4988 TATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031
||| || | | ||| ||| ||||||||| |||||||| ||
Sbjct 47926 TATGAAATGCCTTTCATCATTTGTAAGTTTTTCCCAGTGGGTCA 47969
Score = 109 bits (120), Expect = 5e-19
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432
||| |||| ||||||||||||| || ||||| ||||| || | |||||| || |||||
Sbjct 42110 AAGTAATCTATCAGCTACAAATTGAATGTACTGTCTCATAAGGTTGCAGTTCATACCAAT 42169
Query 4433 TA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491
| |||| || || | || | || | |||||||||||| |||||||| || || | |
Sbjct 42170 CATATCT-ACCGGCAAAGCTTCAGTAAGAAACTCTTGTTCAATAGTTACAGCATCCTTAA 42228
Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACG 4551
| || ||||| | || ||| | || ||||| | || || | |||| | ||| |
Sbjct 42229 TAATTTCTTTCACTTCATCCTCAGTCGGTTTTTGAACCAAATGCTTGAACATGAGACATG 42288
Query 4552 CAAAATCACAATGCAAACC 4570
||||||||||||||| |||
Sbjct 42289 CAAAATCACAATGCAGACC 42307
Score = 91.5 bits (100), Expect = 1e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101
|||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||||
Sbjct 55191 TAAATCTACTTCTTCTGCTGTCCAGAATGAGGCTTCAGCTTTTTTGTACATTTGCCAAAT 55250
Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
||| |||||||||| |||| || ||||||||
Sbjct 55251 ATCTTGATACTGAATAGGAAAAATCACAAATCT 55283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426920565895736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |