Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_030925.1 Length=138081 Score E Sequences producing significant alignments: (Bits) Value seq373 102 7e-17 >seq373 Length=1274844 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 46625 TAAAGCATAGCTAGCTATATTGAAGGGTACACCTAAGAAAAAATCTGACGATCTCTGATA 46684 ||| ||||| ||||| ||||| ||||| ||||| | ||||| ||| | || | |||||| Sbjct 929520 TAATGCATAACTAGCAATATTAAAGGGAACACCAAGGAAAATATCAGCTGAACGCTGATA 929461 Query 46685 TAACTTACAGGATAGGGTGCCGTTATCTACATAGAACTGGAACATAGTGTGGCAACTTGG 46744 ||||| ||| ||||| | || | | ||||| || ||||| | | |||||| ||| Sbjct 929460 TAACTGACATGATAGTTTTCCATCTGCCACATAAAATTGGAATAAGGCATGGCAAGGTGG 929401 Query 46745 TAAAGCTATTTCATCTAGTACACTAGGATTCCACGCTGTTACAAGAAGTCTCCTAGAATT 46804 || || |||||||||| || ||| ||||| |||| |||| | | || |||| Sbjct 929400 TAGTGCCATTTCATCTACTAATGCAGGGTTCCAAGCTGAGACAATCAAACGCCGCGAATC 929341 Query 46805 TGGGTTAGACTTAATCTGTTCTAT 46828 || |||| |||||| ||| || Sbjct 929340 AGGATTAGTGTTAATCATTTCGAT 929317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441594307501120