Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq1191 127 3e-24
seq179 113 6e-20
seq1991 111 2e-19
seq2298 107 3e-18
seq1948 107 3e-18
seq2441 95.1 2e-14
>seq1191
Length=1801643
Score = 127 bits (140), Expect = 3e-24
Identities = 179/249 (72%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262
|||||||||||||||||||| | | ||||| || || | |||| | | |||
Sbjct 1359089 GACCGTACGGGAACCGGTACTATCAGCGTCTTCGGACATCAAAGCCGTTACGACCTGTCG 1359030
Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCACGAACT 99321
|||||||||||| || | || || ||| |||| ||| | || ||||| ||||| |
Sbjct 1359029 GAAGGCTTTCCGGTGCTGACTACCAAGAAGCTG-CACCTTAAGTCCATTATATACGAATT 1358971
Query 99322 GCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTAT 99381
||| ||||| ||| ||||||||||||||| |||||||| | || |||| || |||
Sbjct 1358970 GCTATGGTTTCTGGCAGGCGATACCAATGTAAAATATTTGCAGGAACATGGAGTGCGTAT 1358911
Query 99382 TTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGGCG 99441
||| |||||||| || | ||||||| || || | |||||||| | || |||||
Sbjct 1358910 ATGGAACGAATGGGCTGACGAGAATGGCGAACTAGGCCATATATACGGTTATCAATGGCG 1358851
Query 99442 GTCTTGGCC 99450
|| |||||
Sbjct 1358850 TTCGTGGCC 1358842
>seq179
Length=2312354
Score = 113 bits (124), Expect = 6e-20
Identities = 183/261 (70%), Gaps = 12/261 (5%)
Strand=Plus/Plus
Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTA---TTTTCGGGCACCAGATGCGTTTC 99253
|| ||||||||||| ||||| || || ||| | ||||||| |||||||| | ||
Sbjct 182147 AAAAAAGACCGTACAGGAACAGGAAC---GTCCAGCGTTTTCGGTTACCAGATGAGATTT 182203
Query 99254 AATCTGCAAGAAGGCTTTCCG---CTGGTAACGACTAAGCGCTGTCACATGCGTTCGATT 99310
|| || || ||||| |||||| ||| ||| | || | ||| | || ||
Sbjct 182204 AACCTTCAGGAAGGGTTTCCGTGTCTGACAACCAAAAAAC---TTCATTTAAAATCAATA 182260
Query 99311 ATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAAT 99370
||| | ||| | | ||||| |||| || ||||||||| | |||||| ||||||| ||
Sbjct 182261 ATTTATGAATTATTATGGTTTTTGAACGGAGATACCAATATAAAATATCTAAATGAACAT 182320
Query 99371 GGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGT 99430
|| |||| || ||| |||||||| | || | || |||||||||| ||||||||
Sbjct 182321 GGAGTAAAAATATGGAACGAATGGGCCGATGAAAACGGAGACCTCGGACATGTATACGGA 182380
Query 99431 AAACAGTGGCGGTCTTGGCCT 99451
| || ||||| || ||||||
Sbjct 182381 TATCAATGGCGTTCATGGCCT 182401
>seq1991
Length=147557
Score = 111 bits (122), Expect = 2e-19
Identities = 179/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAAT 99256
|||| ||||| || ||||| || || | | ||||||||||||||||||| || |
Sbjct 6618 AAGAGCGACCGGACAGGAACGGGCACGATCAGTGTTTTCGGGCACCAGATGCGCTTTGAC 6559
Query 99257 CTGCAAGAAGGCTTTCCGCTGGTAACGAC-TAAGCGCTGTCACATGCGTTCGATTATTCA 99315
|| | || || ||||| | | || || || ||| || | || ||||| || ||
Sbjct 6558 CTCAATGAGGGTTTTCCCGTACTGACCACAAAAAAACTG-CATCTACGCTCGATCATACA 6500
Query 99316 CGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGT 99375
||||| |||||||| || || || ||||||||| | |||||| | | |||||| ||
Sbjct 6499 TGAACTTCTGTGGTTTCTCAAGGGAGATACCAATATAAAATATCTTCACGATAATAACGT 6440
Query 99376 AACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACA 99435
|| || |||||||| ||| | | || ||| |||| || ||||| ||||| | ||
Sbjct 6439 TACGATATGGGACGAGTGGGCGGATGCCGACGGCAACCTGGGCCCGGTCTACGGATACCA 6380
Query 99436 GTGGCGGTCTTGGCC 99450
|||||| ||||||
Sbjct 6379 GTGGCGCAGTTGGCC 6365
>seq2298
Length=83281
Score = 107 bits (118), Expect = 3e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCAA 99262
|||||||||||||| ||||| | | ||||| | || |||||||| ||| || ||
Sbjct 73449 GACCGTACGGGAACGGGTACAAAAAGTGTATTCGGATATCAAATGCGTTTTAATTTGGAA 73390
Query 99263 GAAGGCTTTCCGCTGGTAACGACTAAGCG-CTGTCACATGCGTTCGATTATTCACGAACT 99321
|| || || || | ||||||| ||| ||| || || ||||||||| | || |
Sbjct 73389 GAGGGTTTCCCTGTTTTAACGACAAAGAAACTG-CATCTGAAATCGATTATTTATGAGTT 73331
Query 99322 GCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACTAT 99381
||| ||||| | || || ||||||||| | |||||| |||| ||| | || || | |||
Sbjct 73330 GCTATGGTTTTTAAAGGGTGATACCAATATTAAATATCTAAAAGATCACGGCGTTAGTAT 73271
Query 99382 TTGGGACGAATGG 99394
|||||||||||||
Sbjct 73270 TTGGGACGAATGG 73258
>seq1948
Length=475166
Score = 107 bits (118), Expect = 3e-18
Identities = 188/269 (70%), Gaps = 6/269 (2%)
Strand=Plus/Plus
Query 99185 GAAGGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCT--GTCTATTTTCGGGCACC 99242
||||| || ||| ||||||| || |||||||| ||| || ||||| || ||||
Sbjct 215244 GAAGGAGTAAAGAAAGAAGACCGAACCGGAACCGGAACCTATAGTGTATTT--GGTCACC 215301
Query 99243 AGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGC 99302
||||||| || || || ||||||| ||||| || | || || || | || |
Sbjct 215302 AGATGCGGTTTAACATGGAAGAAGGATTTCCTTTGCTTACCACCAAAAAATTACATCTTA 215361
Query 99303 GTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAA 99362
|||||||| |||| || |||||||| |||||||| || || || | ||||||||
Sbjct 215362 AATCGATTATATACGAGCTACTGTGGTTTCTGAAAGGAGACACGAACGCTAAATATTTGC 215421
Query 99363 ATGATAATGGTGTAACTATTTGGGACGAAT-GGAAGAACAAAGATGGCGACCTCGGACCG 99421
| ||| ||||||| ||| ||| |||||| || ||| | | |||| | || ||||
Sbjct 215422 AAGATCATGGTGTTCGTATCTGGAACGAATGGGCAGATGAGA-ATGGTAATCTTGGACAT 215480
Query 99422 GTATACGGTAAACAGTGGCGGTCTTGGCC 99450
| ||||| | || ||||| || |||||
Sbjct 215481 ATTTACGGGTATCAATGGCGTTCGTGGCC 215509
>seq2441
Length=2995558
Score = 95.1 bits (104), Expect = 2e-14
Identities = 212/313 (68%), Gaps = 4/313 (1%)
Strand=Plus/Minus
Query 99142 AATCATGGAACAGTATCAAGATTTAATGACTCGCGTAATGAGCGAAGGCGTGCCGAAGAA 99201
||||||| |||| ||| |||||| | | | ||| | | |||||||| | || |
Sbjct 2867190 AATCATGAAACAATATTTGGATTTACTAGATAGAGTACTAAAAGAAGGCGTACACAAAGA 2867131
Query 99202 AGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCA 99261
||||||||| || || || || | | ||||| |||||||||||||| | || |
Sbjct 2867130 AGACCGTACAGGCACAGGAACAATCAGCGTATTCGGACACCAGATGCGTTTTGACCTTAA 2867071
Query 99262 AGAAGGCTTTCCGCTG-GTAACGACTAAG-CGCTGTCACATGCGTTCGATTATTCACGAA 99319
|| || ||||| || | || || ||| ||| |||| || || |||||||| |||
Sbjct 2867070 CGATGG-TTTCCCATGCCTGACTACCAAGAAGCT-TCACCTGAAATCCATTATTCATGAA 2867013
Query 99320 CTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACT 99379
|| || ||||| ||||||| ||||| ||||| || || | | || || || ||| |
Sbjct 2867012 CTTCTATGGTTTTTGAAAGGTGATACAAATGTTAAGTACCTCCAAGACAACGGAGTACGT 2866953
Query 99380 ATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGG 99439
|| ||| | |||||| || | | || || | || | || || || | || |||
Sbjct 2866952 ATCTGGAATGAATGGGCAGACGAGAACGGAGAATTAGGTCACGTTTATGGATACCAATGG 2866893
Query 99440 CGGTCTTGGCCTG 99452
|| || |||||||
Sbjct 2866892 CGTTCCTGGCCTG 2866880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716241967806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |