Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq714 134 2e-26 seq211 98.7 1e-15 >seq714 Length=734366 Score = 134 bits (148), Expect = 2e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||| ||| |||||||||||| | ||||| |||||||||||||||| ||||| || || Sbjct 47749 ATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCATTGC 47808 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || ||||| || || |||||||||||||| || | ||||| ||| | |||| ||| Sbjct 47809 AATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCTTTC 47868 Query 47010 AGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAA 47068 |||| || ||||| || |||||||| || ||||| ||||| | ||| ||| | Sbjct 47869 -TACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGATA 47927 Query 47069 TAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGT 47104 | |||| ||||||| | || ||||| | ||||| Sbjct 47928 TGAAATGCCTTTCATCATTTGTAAGTTTTTCCCAGT 47963 Score = 118 bits (130), Expect = 2e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 ||||||| |||||||||||| |||||||||||||| || || |||||||| ||||| | | Sbjct 55186 TTTGATAAATCTACTTCTTCTGCTGTCCAGAATGAGGCTTCAGCTTTTTTGTACATTTGC 55245 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATA 47235 || ||||| |||| || || |||||||| |||||||| ||||||| | | | || | Sbjct 55246 CAAATATCTTGATACTGAATAGGAAAAATCACAAATCTTCTTGGATTCTCTCTTAATAAA 55305 Query 47236 GGTTC 47240 ||||| Sbjct 55306 GGTTC 55310 Score = 113 bits (124), Expect = 6e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46461 TCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 46520 |||||| || || |||| || ||| | |||| | | || ||||| || || | | Sbjct 42116 TCTATCAGCTACAAATTGAATGTACTGTCTCATAAGGTTGCAGTTCATACCAATCATATC 42175 Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGA 46580 ||||| | ||| || ||||||||||||||||||||||| ||||||||| || || Sbjct 42176 TACCGGCAAAGCTTCAGTAAGAAACTCTTGTTCAATAGTTACAGCATCCTTAATAATTTC 42235 Query 46581 TGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATC 46640 | | ||| |||||| | ||| || | |||||| || ||||| | |||||||||||| Sbjct 42236 TTTCACTTCATCCTCAGTCGGTTTTTGAACCAAATGCTTGAACATGAGACATGCAAAATC 42295 Query 46641 ACAATGAAGGCC 46652 |||||| || || Sbjct 42296 ACAATGCAGACC 42307 Score = 107 bits (118), Expect = 3e-18 Identities = 162/227 (71%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||| || ||| |||||||| || || | || ||||| ||||| | || || Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAA-AAGAATATGCCTTCTACAGCCGCGAATGC 46772 ||||| || || | || |||| ||| | | ||||| || || || || || || ||||| Sbjct 43964 AGCCAGAAAATTGAAGC-AAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGC 44022 Query 46773 GACAAGTCTCTCTCCGTAACTGGCA---TCATTATGAATCCACCTTTGAGCCCAATCAGC 46829 || | |||||| || || | ||| ||||| ||||||| | |||||||| || Sbjct 44023 TACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGC 44082 Query 46830 CTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 46876 || || |||||||| ||||||||||| ||||||||||| | | ||| Sbjct 44083 TTTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAATAAATAGT 44129 >seq211 Length=1809889 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 || || || || || || | ||||| |||||||| || |||||||||||||| || | | Sbjct 908719 TTGTTGCCACCTTGGTCCACATATCGCGCAGTGTTGTTGTAAACTCTCAACATGGGTACA 908660 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867 | ||| ||||| | ||||| || |||| ||| || ||| || | ||| | Sbjct 908659 AGGCCATTAGAAATTCCATTCGTACCAGCAATGTAGGAGCCAGTAGCCCTGATACAGTGA 908600 Query 76868 ATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCA 76927 | | || || ||||| || || ||| ||||||| ||||| |||||| ||||||| Sbjct 908599 ACATGAAGACCAATTCCACCAGCAGATTTTGAGATTAAGGCACATTGTTTCAGTGTGTCA 908540 Query 76928 TAGATGCCCTCTATACTATCATCCATCAT 76956 ||||| ||||| || || || || |||| Sbjct 908539 TAGATCCCCTCAATGCTGTCCTCTTTCAT 908511 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| |||| ||||||| | ||| || || | || ||||| || | |||| Sbjct 922619 TGAAATTCTCCGGACAGAACTCTTCTTGAGTAGATGTTCGTTGTGTATGGCTCAAAAGAT 922560 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGC 75828 |||||||||||||| ||||||||||| ||||| || ||||| || || Sbjct 922559 TCATTGTTTCCCAATATTTGAGCAGTGGAAGCCGTAGGCATGGGAGC 922513 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75980 TTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTC 76039 |||||||| | ||| || || ||||| | || || || || || ||||| || |||| | Sbjct 919215 TTTTCAGCCAATTCACAGCTTGCCTCAAGAGCTCCATAGTAGATAGTTTCAAATATCTGC 919156 Query 76040 TTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCT 76099 || || || || ||||| ||||||||||||| | | || || ||||||||| Sbjct 919155 TTGTTTAGCAACTGAGCTTCCTCACTATCAAAAGGAAACCTCATCAGTATGAATGCATCT 919096 Query 76100 GCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || | ||||| | |||||| |||||||||| || | | | |||||| || Sbjct 919095 GCCAAGCCCTGGATTCCAATGCCAATAGGTCGGTGACGCATGTTGGAATTT 919045 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||| | ||| | ||||| || || || ||||||||||| | | || || |||||||| Sbjct 907239 AGTTGCAGCACTGAACAAAGTGGGTGAAGCATGAGTGAAAATTCTCTCCGACAGTAGATT 907180 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || |||||||| |||| || ||||| ||| ||||| || || || | ||||| Sbjct 907179 ATAGGTTTCAATGGCTGCATCAATATCTTCACCATGGATTCCAACTGCAACTCTCATCAG 907120 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149 |||||| ||||||| ||| | | ||| ||| ||| Sbjct 907119 CATATGTTGAGGTCTCTCTGCTGGTTTACCATTGATT 907083 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || ||||| || | ||||||||| | | |||||||||| | Sbjct 909930 TCAAATTCCTCGCCCCAGCAGTCTGAAAGACCAGGACAAGCGTGTGGACACATCAGGCTC 909871 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||| ||| |||||| |||| ||| || |||||||| ||||| || ||| || Sbjct 909870 CACATTTCATTGAGCTTAACACGTTCCATGAAAAGATCAGGAATCCAGAGCGCATAGAAC 909811 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | |||| || |||| |||||| || || || || || || | || ||||| || | Sbjct 909810 ATGTCTCTGGCTCTAATTTCTTCTTTGCCAGTGTTTTTCTTCAAGTCAAGGAATTCAAAC 909751 Query 76700 ATATCAGAATGCCATGGTTCTAGATA 76725 | |||| |||||||||||| | ||| Sbjct 909750 ACGTCAGCATGCCATGGTTCCAAATA 909725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712713461629440