Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq2029 140 9e-29 >seq2029 Length=231691 Score = 140 bits (154), Expect = 9e-29 Identities = 194/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 26930 TCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCCT 26989 ||||| || || || ||||| ||||||||||||||||||||||||||| | |||| |||| Sbjct 11491 TCAGTAGTATAACGGTCAACACCTTGCTGATCAGTCCATTTACGGGTTTGTAGACGGCCT 11550 Query 26990 TCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCCG 27049 || | ||| ||| ||||| ||| |||| ||| ||||||| || | ||| || Sbjct 11551 TCTACATACAGCTTTGAACCTTTATGCACATATTGCCCAACGATTTCAGCTAACTTACCA 11610 Query 27050 AAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTTC 27109 |||| || |||||||||||||| || | || | | |||| || || ||||||||| Sbjct 11611 AAGAATACTACGCGGTGCCATTCGGTACGTTCCTGTTGTTCACCAGTATTTTTATCTTTC 11670 Query 27110 CACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCGC 27169 || || | ||||| | | | | || ||||| || ||||| |||||| Sbjct 11671 CATGCGTCAGAAGTGGCTAAAGAAACAGTTGCTACTGCATTGCCGTTAGGCATATAGCGC 11730 Query 27170 ACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 | |||||| || || || | |||||||| ||| Sbjct 11731 ATTTCTGGCTCATTACCAATATTACCGACTAA 11762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133976545019520