Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031056.1 Length=157501 Score E Sequences producing significant alignments: (Bits) Value seq373 82.4 8e-11 >seq373 Length=1274844 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 3040 TATTGACCAGTTAAAGAATGTGATTGAAGAGATTAAAAAGAACCCTGACTCAAGACGTCT 3099 |||||| ||| | | || |||| ||| |||||| | || ||||| || | ||| | Sbjct 929295 TATTGATCAGATCAGTAAGTTGATCGAAATGATTAACACTAATCCTGATTCGCGGCGTTT 929354 Query 3100 ACTTGTATCAGCGTGGAATCCTTCAGAACTAGCAATTAGTGTATTACCACCATGCCATTA 3159 |||| ||||| ||||| ||| || | ||| | | | ||||||| |||||| Sbjct 929355 GATTGTCTCAGCTTGGAACCCTGCATTAGTAGATGAAATGGCACTACCACCTTGCCATGC 929414 Query 3160 CTCGTATCAGTTATATGTAGTAGATGGTAAGTTAAGCTTAATGTTCAATATGAGATCGAA 3219 || | || || ||||| | |||||| || || | ||| || | | || Sbjct 929415 CTTATTCCAATTTTATGTGGCAGATGGAAAACTATCATGTCAGTTATATCAGCGTTCAGC 929474 Query 3220 TGATATTTTCCTAGGTTTACCCTTTAACATTGCTAGTTATGCTCTATT 3267 |||||||||||| ||| | |||||||| |||||||||||||| |||| Sbjct 929475 TGATATTTTCCTTGGTGTTCCCTTTAATATTGCTAGTTATGCATTATT 929522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503719049075520