Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 80.6 9e-11
>seq1094
Length=2708314
Score = 80.6 bits (88), Expect = 9e-11
Identities = 117/162 (72%), Gaps = 5/162 (3%)
Strand=Plus/Plus
Query 40155 CGCCGGTCATCG---AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGG 40211
|||| ||||||| ||||| || || | ||||||||||| | || ||||| || |||
Sbjct 2100527 CGCCCGTCATCGTCGAAGTCAATATCTATATCGGGCATGGATATACGGTCGGGATTGAGG 2100586
Query 40212 AACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAG 40271
|| |||||||| | ||| | | | || || || | || ||||| || || || ||
Sbjct 2100587 AAACGCTCGAACAGGAGGTCATACTTAATTGGATCAATATCCGTGATACCCAGACAATAT 2100646
Query 40272 GCGACCAGC-GAACCGGCAGCCGAGCCACGTCCGGGTCCGAC 40312
|| | |||| ||||||||||| || ||||| || || || ||
Sbjct 2100647 GCTA-CAGCAGAACCGGCAGCAGATCCACGCCCCGGCCCCAC 2100687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160093653747776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |