Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq1094 80.6 9e-11 >seq1094 Length=2708314 Score = 80.6 bits (88), Expect = 9e-11 Identities = 117/162 (72%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 40155 CGCCGGTCATCG---AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGG 40211 |||| ||||||| ||||| || || | ||||||||||| | || ||||| || ||| Sbjct 2100527 CGCCCGTCATCGTCGAAGTCAATATCTATATCGGGCATGGATATACGGTCGGGATTGAGG 2100586 Query 40212 AACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAG 40271 || |||||||| | ||| | | | || || || | || ||||| || || || || Sbjct 2100587 AAACGCTCGAACAGGAGGTCATACTTAATTGGATCAATATCCGTGATACCCAGACAATAT 2100646 Query 40272 GCGACCAGC-GAACCGGCAGCCGAGCCACGTCCGGGTCCGAC 40312 || | |||| ||||||||||| || ||||| || || || || Sbjct 2100647 GCTA-CAGCAGAACCGGCAGCAGATCCACGCCCCGGCCCCAC 2100687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160093653747776