Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031080.1
Length=160985
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 87.8 2e-12
seq1885 87.8 2e-12
seq5385 84.2 2e-11
seq1094 84.2 2e-11
seq7088 82.4 8e-11
>seq2787
Length=1710943
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 100842 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 100901
||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 516232 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 516173
Query 100902 AACCCGTTCTTCGCTC 100917
| ||||| |||||||
Sbjct 516172 ATCCCGTCTTTCGCTC 516157
Score = 86.0 bits (94), Expect = 6e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 100843 TGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 100902
|||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| |
Sbjct 253217 TGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAA 253158
Query 100903 ACCCGTTCTTCGCTC 100917
||||| |||||||
Sbjct 253157 TCCCGTCTTTCGCTC 253143
>seq1885
Length=148911
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 100842 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 100901
||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 88486 ATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGA 88545
Query 100902 AACCCGTTCTTCGCTC 100917
| ||||| |||||||
Sbjct 88546 ATCCCGTCTTTCGCTC 88561
>seq5385
Length=39409
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 100843 TGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 100902
|||||| |||||||| ||||||||| | ||||||||||||| | ||||||||| |||
Sbjct 3215 TGCGAAAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAG 3156
Query 100903 ACCCGTTCTTCGCTCT 100918
|||||| ||||||||
Sbjct 3155 TCCCGTTTTTCGCTCT 3140
>seq1094
Length=2708314
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 100844 GCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTAA 100903
||||| ||||||||| ||||||||| | ||||||||||||| | ||||||||| ||| |
Sbjct 1617478 GCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAAT 1617419
Query 100904 CCCGTTCTTCGCTC 100917
||||| |||||||
Sbjct 1617418 CCCGTCTTTCGCTC 1617405
>seq7088
Length=425276
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 97534 GTAGCGGTGTAGAGCAGCTAGGTAGCTCGCCGGGCTCATAACCCGGAGGACGCGTGTTCG 97593
|| |||| ||||||||||| ||||||||| ||||||||||||||||||| ||| |||||
Sbjct 185437 GTCGCGGGGTAGAGCAGCT-GGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCG 185495
Query 97594 AATCACGCCACCGCCAC 97610
|||| | | |||| ||
Sbjct 185496 AATCCTGTCCCCGCAAC 185512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514864394062400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |