Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 158 2e-33
seq373 149 1e-30
seq2441 109 9e-19
seq179 104 4e-17
seq1948 102 1e-16
seq21293 89.7 8e-13
seq3099 89.7 8e-13
seq2321 89.7 8e-13
seq2298 89.7 8e-13
seq1601 89.7 8e-13
seq6689 87.8 3e-12
>seq1991
Length=147557
Score = 158 bits (174), Expect = 2e-33
Identities = 183/247 (74%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 201847 CGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACA 201906
|||||| || || |||||||| || ||||||||| | ||||||||||||| || | |
Sbjct 6613 CGACCGGACAGGAACGGGCACGATCAGTGTTTTCGGGCACCAGATGCGCTTTGACCTCAA 6554
Query 201907 AGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCT 201966
|| |||||||| | | ||||| ||||| | || || || || ||||| ||||| ||
Sbjct 6553 TGAGGGTTTTCCCGTACTGACCACAAAAAAACTGCATCTACGCTCGATCATACATGAACT 6494
Query 201967 GCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCAT 202026
|||||||| |||| ||| || ||||| || | ||| | | || || ||||| || ||
Sbjct 6493 TCTGTGGTTTCTCAAGGGAGATACCAATATAAAATATCTTCACGATAATAACGTTACGAT 6434
Query 202027 CTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086
|||||||| ||||||||| |||| || | |||||||| ||||| | || |||||
Sbjct 6433 ATGGGACGAGTGGGCGGATGCCGACGGCAACCTGGGCCCGGTCTACGGATACCAGTGGCG 6374
Query 202087 TAGCTGG 202093
|| |||
Sbjct 6373 CAGTTGG 6367
>seq373
Length=1274844
Score = 149 bits (164), Expect = 1e-30
Identities = 211/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGAC 201850
|||||||||||||| || ||| ||||| ||||||| || ||||| | | || | ||
Sbjct 928972 ATGAAACAATATCTTGATTTAATGCGTCATGTTCGGGATAACGGAGTATTTAAGGAAGAT 929031
Query 201851 CGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAA 201910
||||| || ||||| || ||| || || || ||||||||||| || ||
Sbjct 929032 CGTACAGGAACGGGTACTTATAGTGTATTTGGTTATCAAATGCGCTTTAATCTAGCGGAT 929091
Query 201911 GGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTG 201970
|| |||||| | || ||||| ||||| || ||| || || ||||||||| | ||
Sbjct 929092 GGGTTTCCGTTAGTTACCACTAAAAAATGCCATCTTAAGTCGATTATCCATGAGTTATTG 929151
Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030
||||| | ||| || ||||| || | || | ||||| || || | || |||
Sbjct 929152 TGGTTTTTGCAGGGCGATACCAATATTCGTTACCTTAAAGAAAATGGTGTGAGTATTTGG 929211
Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087
|| |||||||| ||| |||||||||| |||||||| ||||| ||| | |||||||||
Sbjct 929212 GATGAATGGGCTGATGAAAACGGTGATTTAGGCCCTGTGTATGGTTATCAATGGCGT 929268
>seq2441
Length=2995558
Score = 109 bits (120), Expect = 9e-19
Identities = 174/247 (70%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907
|| |||||||| || ||||| || |||||| |||| || ||| | ||||| | ||
Sbjct 2670433 GATCGTACCGGAACAGGCACAATCAGTGTTTTTGGACATCAAATGAGATTTAATCTGGAA 2670374
Query 201908 GAAGGTTTTCCGCTGG-TCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCT 201966
|| |||||||| ||| | || |||||||| |||| | || |||||||| || ||
Sbjct 2670373 GATGGTTTTCC-CTGCCTTACTACCAAAAAACTTCATTTAAAGTCCATCATCCACGAACT 2670315
Query 201967 GCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCAT 202026
|||||||||| | ||||| || || | | || | |||| ||| || ||
Sbjct 2670314 TTTGTGGTTCCTTAAAGGTGATACAAATGTAAAATACCTACAAGAGAACGGGGTTCGTAT 2670255
Query 202027 CTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086
|||| | |||||||||||| ||||||| || || || | || || ||| | ||||||||
Sbjct 2670254 CTGGAATGAATGGGCGGATGAAAACGGAGATTTGGGTCATGTCTATGGTTATCAATGGCG 2670195
Query 202087 TAGCTGG 202093
| ||||
Sbjct 2670194 TTCCTGG 2670188
>seq179
Length=2312354
Score = 104 bits (114), Expect = 4e-17
Identities = 201/297 (68%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCCGAC 201850
||| ||||||||||||| ||| | |||| |||||||| ||||||| |||
Sbjct 182096 ATGCAACAATATCTGGATTTATTAAAACATGTAAAAGAAAACGGAACTGTAAAAAAAGAC 182155
Query 201851 CGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGAA 201910
||||| || || || || | |||||||| ||||||| | |||||| | || |||
Sbjct 182156 CGTACAGGAACAGGAACGTCCAGCGTTTTCGGTTACCAGATGAGATTTAACCTTCAGGAA 182215
Query 201911 GGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCTG 201970
|| |||||| | || |||||||| |||| | ||||| || |||| | |
Sbjct 182216 GGGTTTCCGTGTCTGACAACCAAAAAACTTCATTTAAAATCAATAATTTATGAATTATTA 182275
Query 201971 TGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTGG 202030
||||| | | || || ||||| || | ||| | || || | || | || |||
Sbjct 182276 TGGTTTTTGAACGGAGATACCAATATAAAATATCTAAATGAACATGGAGTAAAAATATGG 182335
Query 202031 GACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087
|||||||||| ||| ||||||| ||| | || | || ||||| | |||||||||
Sbjct 182336 AACGAATGGGCCGATGAAAACGGAGACCTCGGACATGTATACGGATATCAATGGCGT 182392
>seq1948
Length=475166
Score = 102 bits (112), Expect = 1e-16
Identities = 170/246 (69%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 201842 AAAGCCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAAC 201901
|||| ||||| ||||| || || ||| ||| || || | ||||||||| ||||||
Sbjct 215256 AAAGAAGACCGAACCGGAACCGGAACCTATAGTGTATTTGGTCACCAGATGCGGTTTAAC 215315
Query 201902 TTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCAT 201961
| ||||||| ||||| || | ||||||||||| | || ||| || || || |
Sbjct 215316 ATGGAAGAAGGATTTCCTTTGCTTACCACCAAAAAATTACATCTTAAATCGATTATATAC 215375
Query 201962 GAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTC 202021
||||| |||||||| || | || ||||| ||| | |||||| |||| | ||
Sbjct 215376 GAGCTACTGTGGTTTCTGAAAGGAGACACGAACGCTAAATATTTGCAAGATCATGGTGTT 215435
Query 202022 ACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAA 202081
|||||| |||||||||| ||| | || ||| | | || | | ||||| | |||
Sbjct 215436 CGTATCTGGAACGAATGGGCAGATGAGAATGGTAATCTTGGACATATTTACGGGTATCAA 215495
Query 202082 TGGCGT 202087
||||||
Sbjct 215496 TGGCGT 215501
>seq21293
Length=1177
Score = 89.7 bits (98), Expect = 8e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 4030 CTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089
||| |||||||| |||||||||||| ||||||||||||| ||||||||| |||| ||||
Sbjct 637 CTCATAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAGTCC 578
Query 4090 ACTCGAGACAACCA 4103
||| ||| | ||||
Sbjct 577 ACTTGAGCCCACCA 564
>seq3099
Length=1637421
Score = 89.7 bits (98), Expect = 8e-13
Identities = 200/298 (67%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 201791 ATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAA-AACGGGGATGTAAAAGCCGA 201849
||||||||||||| ||| || || ||| | ||| || | | |||||| ||
Sbjct 177097 ATGAAACAATATCACGACCTATTGAAACGTGTACTAGAAGAAGGTACACATAAAAG-TGA 177039
Query 201850 CCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAGA 201909
|||||| ||||| ||||| || ||| ||||||| |||| |||| ||| | ||
Sbjct 177038 CCGTACAGGTACAGGCACAATCAGTGTGTTCGGACATCAGAGCCGCTATAATCTGGCTGA 176979
Query 201910 AGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGCT 201969
|| || || | | ||||| ||||| |||| ||| || ||||| ||||| ||||
Sbjct 176978 GGGATTCCCTGTACTAACCACAAAAAAACTTCATCTTAAATCTATCATATATGAGTTGCT 176919
Query 201970 GTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCTG 202029
||||| | ||||| || || |||||||| ||||| | || ||| ||
Sbjct 176918 TTGGTTTTTAGCAGGTGATACAAATGCGAAGTATTTGCAAGACCATGGAGTACGCATTTG 176859
Query 202030 GGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087
| |||||||||| ||| || | ||| |||| || | | || ||| | || ||||||
Sbjct 176858 GAACGAATGGGCCGATGAAGATGGTAACTTGGGACATATTTATGGTTATCAGTGGCGT 176801
>seq2321
Length=120357
Score = 89.7 bits (98), Expect = 8e-13
Identities = 68/78 (87%), Gaps = 3/78 (4%)
Strand=Plus/Minus
Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCTACT 4092
||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||| |
Sbjct 110012 GTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAAGTTCAAGTCTTC- 109954
Query 4093 CGAGACAACCAGCATTAT 4110
| |||| ||| ||||||
Sbjct 109953 CCAGAC--CCACCATTAT 109938
>seq2298
Length=83281
Score = 89.7 bits (98), Expect = 8e-13
Identities = 173/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 201790 CATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGA-TGTAAAAGCCG 201848
|||||||||||||| || | | || ||||| || ||||| | | |||||| |
Sbjct 73507 CATGAAACAATATCAAGATCTTTTACGGCATGTTATGGATAACGGTAACTTTAAAAGT-G 73449
Query 201849 ACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAAG 201908
||||||| || ||||| || ||| |||||| || ||||| ||||| || |||
Sbjct 73448 ACCGTACGGGAACGGGTACAAAAAGTGTATTCGGATATCAAATGCGTTTTAATTTGGAAG 73389
Query 201909 AAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTGC 201968
| ||||| || | | || || || || | || || || || || ||||| |||
Sbjct 73388 AGGGTTTCCCTGTTTTAACGACAAAGAAACTGCATCTGAAATCGATTATTTATGAGTTGC 73329
Query 201969 TGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATCT 202028
| ||||| | | |||||| ||||| || | ||| | ||||| || ||| | || |
Sbjct 73328 TATGGTTTTTAAAGGGTGATACCAATATTAAATATCTAAAAGATCACGGCGTTAGTATTT 73269
Query 202029 GGGACGAATGGGC 202041
|||||||||||||
Sbjct 73268 GGGACGAATGGGC 73256
>seq1601
Length=193913
Score = 89.7 bits (98), Expect = 8e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 4030 CTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089
||| |||||||| |||||||||||| ||||||||||||| ||||||||| |||| ||||
Sbjct 147000 CTCATAGCTCAGGTGGTTAGAGCGCGCGCCTGATAAGCGCGAGGTCGGTGGTTCGAGTCC 147059
Query 4090 ACTCGAGACAACCA 4103
||| ||| | ||||
Sbjct 147060 ACTTGAGCCCACCA 147073
>seq6689
Length=8825
Score = 87.8 bits (96), Expect = 3e-12
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCTA 4090
||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||
Sbjct 4193 GTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATAGTTCAAGTCTA 4136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787758997808320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |