Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq1690 109 7e-19
seq4222 95.1 2e-14
seq3213 95.1 2e-14
seq1604 95.1 2e-14
seq1752 89.7 6e-13
seq5996 87.8 2e-12
seq3885 87.8 2e-12
seq3496 86.0 8e-12
seq2760 86.0 8e-12
seq1991 86.0 8e-12
seq1094 86.0 8e-12
seq126 86.0 8e-12
seq4013 84.2 3e-11
seq179 84.2 3e-11
seq2330 82.4 9e-11
seq1210 82.4 9e-11
>seq1690
Length=1574822
Score = 109 bits (120), Expect = 7e-19
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19646 CACGGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCG 19705
|| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1439859 CATGGGGATTTAGCTCAGTTGGTAGAGCACCTGCCTTGCAAGCAGGATGTCAGGAGTTCG 1439800
Query 19706 AGTCTCCTATTCTCC 19720
| ||||||| |||||
Sbjct 1439799 ACTCTCCTAATCTCC 1439785
>seq4222
Length=21366
Score = 95.1 bits (104), Expect = 2e-14
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 165779 AGGGTCA-GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCG 165837
|||||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct 17746 AGGGTCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTTCG 17805
Query 165838 AGTCCTGTC 165846
| |||||||
Sbjct 17806 AATCCTGTC 17814
>seq3213
Length=2170589
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 19649 GGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 19708
|||| ||||||||| |||||||||||||||||||||| ||||| || |||||||||| |
Sbjct 229446 GGGGGATTAGCTCATTTGGTAGAGCACCTGCTTTGCACGCAGGGGGTGAGGAGTTCGATT 229505
Query 19709 CTCCTATTCTCC 19720
||||||| ||||
Sbjct 229506 CTCCTATCCTCC 229517
>seq1604
Length=351056
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 165784 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 165843
||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 165844 GTCTG 165848
| |||
Sbjct 255347 GACTG 255343
>seq1752
Length=186427
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 165786 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 165844
||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||
Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639
>seq5996
Length=10664
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 19646 CACGGGGAATTAGCTCAGTTGG--TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTT 19703
||||||| |||||||||||||| |||||||||||| ||||| ||||| |||| | |||
Sbjct 3262 CACGGGGGATTAGCTCAGTTGGCTTAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTT 3321
Query 19704 CGAGTCTCCTATTCTCC 19720
|||||| | ||||||||
Sbjct 3322 CGAGTCCCTTATTCTCC 3338
>seq3885
Length=21154
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 19646 CACGGGGAATTAGCTCAGTTGG--TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTT 19703
||||||| |||||||||||||| |||||||||||| ||||| ||||| |||| | |||
Sbjct 3941 CACGGGGGATTAGCTCAGTTGGCTTAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTT 4000
Query 19704 CGAGTCTCCTATTCTCC 19720
|||||| | ||||||||
Sbjct 4001 CGAGTCCCTTATTCTCC 4017
>seq3496
Length=15201
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 19648 CGGGGAATTAGCTCAGTTGG-TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGA 19706
|||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||
Sbjct 7699 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 7640
Query 19707 GTCTCCTATTCTCC 19720
|| ||||||||
Sbjct 7639 CTCCGATATTCTCC 7626
>seq2760
Length=692328
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| ||||||||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 10918 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 10859
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 10858 TCCCGTCCATACCGC 10844
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| ||||||||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 464477 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 464536
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 464537 TCCCGTCCATACCGC 464551
>seq1991
Length=147557
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 19648 CGGGGAATTAGCTCAGTTGG-TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGA 19706
|||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||
Sbjct 145188 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 145129
Query 19707 GTCTCCTATTCTCC 19720
|| ||||||||
Sbjct 145128 CTCCGATATTCTCC 145115
>seq1094
Length=2708314
Score = 86.0 bits (94), Expect = 8e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 165784 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 165843
||||||||||| ||||||||||||| ||||||||| || |||||||||||||| ||||
Sbjct 606441 CAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCGAATCCT 606500
Query 165844 GTCTG 165848
|||||
Sbjct 606501 GTCTG 606505
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| ||||||||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 1549120 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 1549061
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 1549060 TCCCGTCCATACCGC 1549046
>seq126
Length=3533043
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| ||||||||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 377210 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 377269
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 377270 TCCCGTCCATACCGC 377284
>seq4013
Length=24576
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| |||| |||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 3377 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 3436
Query 19347 TCCCATCTATCCCGCC 19362
|||| || || |||||
Sbjct 3437 TCCCGTCCATACCGCC 3452
>seq179
Length=2312354
Score = 84.2 bits (92), Expect = 3e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 165781 GGTC-AGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 165839
|||| |||||||||| ||||||||||||| ||||||||||| || |||| |||||||||
Sbjct 786961 GGTCTAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902
Query 165840 TCCTGTCT 165847
||||| ||
Sbjct 786901 TCCTGACT 786894
>seq2330
Length=1066040
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| |||| |||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 21585 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 21526
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 21525 TCCCGTCCATACCGC 21511
>seq1210
Length=1188399
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346
|| || |||| |||| |||||||| |||||||||||||||||||| | || |||||| ||
Sbjct 1016590 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 1016649
Query 19347 TCCCATCTATCCCGC 19361
|||| || || ||||
Sbjct 1016650 TCCCGTCCATACCGC 1016664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621877620383040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |