Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq1690 109 7e-19 seq4222 95.1 2e-14 seq3213 95.1 2e-14 seq1604 95.1 2e-14 seq1752 89.7 6e-13 seq5996 87.8 2e-12 seq3885 87.8 2e-12 seq3496 86.0 8e-12 seq2760 86.0 8e-12 seq1991 86.0 8e-12 seq1094 86.0 8e-12 seq126 86.0 8e-12 seq4013 84.2 3e-11 seq179 84.2 3e-11 seq2330 82.4 9e-11 seq1210 82.4 9e-11 >seq1690 Length=1574822 Score = 109 bits (120), Expect = 7e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19646 CACGGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCG 19705 || ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1439859 CATGGGGATTTAGCTCAGTTGGTAGAGCACCTGCCTTGCAAGCAGGATGTCAGGAGTTCG 1439800 Query 19706 AGTCTCCTATTCTCC 19720 | ||||||| ||||| Sbjct 1439799 ACTCTCCTAATCTCC 1439785 >seq4222 Length=21366 Score = 95.1 bits (104), Expect = 2e-14 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 165779 AGGGTCA-GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCG 165837 |||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct 17746 AGGGTCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTTCG 17805 Query 165838 AGTCCTGTC 165846 | ||||||| Sbjct 17806 AATCCTGTC 17814 >seq3213 Length=2170589 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 19649 GGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 19708 |||| ||||||||| |||||||||||||||||||||| ||||| || |||||||||| | Sbjct 229446 GGGGGATTAGCTCATTTGGTAGAGCACCTGCTTTGCACGCAGGGGGTGAGGAGTTCGATT 229505 Query 19709 CTCCTATTCTCC 19720 ||||||| |||| Sbjct 229506 CTCCTATCCTCC 229517 >seq1604 Length=351056 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165784 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 165843 ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||| Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348 Query 165844 GTCTG 165848 | ||| Sbjct 255347 GACTG 255343 >seq1752 Length=186427 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 165786 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 165844 ||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639 >seq5996 Length=10664 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 19646 CACGGGGAATTAGCTCAGTTGG--TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTT 19703 ||||||| |||||||||||||| |||||||||||| ||||| ||||| |||| | ||| Sbjct 3262 CACGGGGGATTAGCTCAGTTGGCTTAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTT 3321 Query 19704 CGAGTCTCCTATTCTCC 19720 |||||| | |||||||| Sbjct 3322 CGAGTCCCTTATTCTCC 3338 >seq3885 Length=21154 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 19646 CACGGGGAATTAGCTCAGTTGG--TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTT 19703 ||||||| |||||||||||||| |||||||||||| ||||| ||||| |||| | ||| Sbjct 3941 CACGGGGGATTAGCTCAGTTGGCTTAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTT 4000 Query 19704 CGAGTCTCCTATTCTCC 19720 |||||| | |||||||| Sbjct 4001 CGAGTCCCTTATTCTCC 4017 >seq3496 Length=15201 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 19648 CGGGGAATTAGCTCAGTTGG-TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGA 19706 |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| Sbjct 7699 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 7640 Query 19707 GTCTCCTATTCTCC 19720 || |||||||| Sbjct 7639 CTCCGATATTCTCC 7626 >seq2760 Length=692328 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| ||||||||||||| |||||||||||||||||||| | || |||||| || Sbjct 10918 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 10859 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 10858 TCCCGTCCATACCGC 10844 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| ||||||||||||| |||||||||||||||||||| | || |||||| || Sbjct 464477 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 464536 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 464537 TCCCGTCCATACCGC 464551 >seq1991 Length=147557 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 19648 CGGGGAATTAGCTCAGTTGG-TAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGA 19706 |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| Sbjct 145188 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 145129 Query 19707 GTCTCCTATTCTCC 19720 || |||||||| Sbjct 145128 CTCCGATATTCTCC 145115 >seq1094 Length=2708314 Score = 86.0 bits (94), Expect = 8e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165784 CAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 165843 ||||||||||| ||||||||||||| ||||||||| || |||||||||||||| |||| Sbjct 606441 CAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTGGGTCACAGGTTCGAATCCT 606500 Query 165844 GTCTG 165848 ||||| Sbjct 606501 GTCTG 606505 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| ||||||||||||| |||||||||||||||||||| | || |||||| || Sbjct 1549120 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 1549061 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 1549060 TCCCGTCCATACCGC 1549046 >seq126 Length=3533043 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| ||||||||||||| |||||||||||||||||||| | || |||||| || Sbjct 377210 GGTGTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 377269 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 377270 TCCCGTCCATACCGC 377284 >seq4013 Length=24576 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| |||| |||||||| |||||||||||||||||||| | || |||||| || Sbjct 3377 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 3436 Query 19347 TCCCATCTATCCCGCC 19362 |||| || || ||||| Sbjct 3437 TCCCGTCCATACCGCC 3452 >seq179 Length=2312354 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 165781 GGTC-AGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 165839 |||| |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||| Sbjct 786961 GGTCTAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902 Query 165840 TCCTGTCT 165847 ||||| || Sbjct 786901 TCCTGACT 786894 >seq2330 Length=1066040 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| |||| |||||||| |||||||||||||||||||| | || |||||| || Sbjct 21585 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 21526 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 21525 TCCCGTCCATACCGC 21511 >seq1210 Length=1188399 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19287 GGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAAG 19346 || || |||| |||| |||||||| |||||||||||||||||||| | || |||||| || Sbjct 1016590 GGTGTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG 1016649 Query 19347 TCCCATCTATCCCGC 19361 |||| || || |||| Sbjct 1016650 TCCCGTCCATACCGC 1016664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621877620383040