Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq3496 98.7 1e-15
seq1991 98.7 1e-15
seq1604 95.1 1e-14
seq3436 93.3 5e-14
seq1752 93.3 5e-14
seq1690 91.5 2e-13
seq19236 87.8 2e-12
seq385 87.8 2e-12
seq179 84.2 3e-11
seq3099 82.4 9e-11
seq2951 82.4 9e-11
seq1702 82.4 9e-11
seq788 82.4 9e-11
seq126 82.4 9e-11
>seq3496
Length=15201
Score = 98.7 bits (108), Expect = 1e-15
Identities = 67/74 (91%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 17859 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 17917
||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||
Sbjct 7698 GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGAC 7639
Query 17918 TCCGCTATTCTCCA 17931
|||| |||||||||
Sbjct 7638 TCCGATATTCTCCA 7625
>seq1991
Length=147557
Score = 98.7 bits (108), Expect = 1e-15
Identities = 67/74 (91%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 17859 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 17917
||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||
Sbjct 145187 GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGAC 145128
Query 17918 TCCGCTATTCTCCA 17931
|||| |||||||||
Sbjct 145127 TCCGATATTCTCCA 145114
>seq1604
Length=351056
Score = 95.1 bits (104), Expect = 1e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 157424 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCA 157483
|||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||
Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348
Query 157484 GCCTG 157488
| |||
Sbjct 255347 GACTG 255343
>seq3436
Length=2346199
Score = 93.3 bits (102), Expect = 5e-14
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 158117 TGGAAAGGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCAGCGAAGTGAGAGCTTC 158176
|||| |||||| ||||||| ||| || ||||||||||||| ||||||||||||||
Sbjct 491503 TGGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGAAGTGAGAGCTTC 491562
Query 158177 CGTGGGTTCGAATCCCACCCTTTCCG 158202
|| ||||||||||||| |||| ||||
Sbjct 491563 CGGGGGTTCGAATCCCTCCCTCTCCG 491588
>seq1752
Length=186427
Score = 93.3 bits (102), Expect = 5e-14
Identities = 59/63 (94%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 157420 GTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAA 157479
||||| |||||||||||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct 14702 GTCTC-GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAA 14644
Query 157480 TCC 157482
|||
Sbjct 14643 TCC 14641
>seq1690
Length=1574822
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918
||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||| |
Sbjct 1439856 GGGGATTTAGCTCAGTTGGTAGAGCACCTGCCTTGCAAGCAGGATGTCAGGAGTTCGACT 1439797
Query 17919 CCGCTATTCTCCA 17931
| ||| ||||||
Sbjct 1439796 CTCCTAATCTCCA 1439784
>seq19236
Length=217251
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 158117 TGGAAAGGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCAGCGAAGTGAGAGCTTC 158176
|||| |||||| ||||||| ||| || ||||||||||||| |||||| |||||||
Sbjct 83118 TGGAGAGGTGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTGAAGTGTGAGCTTC 83059
Query 158177 CGTGGGTTCGAATCCCACCCTTTCCG 158202
|| ||||||||||||| |||| ||||
Sbjct 83058 CGGGGGTTCGAATCCCTCCCTCTCCG 83033
>seq385
Length=1145925
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 17858 AGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 17916
|||||||||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||
Sbjct 504577 AGGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGA 504636
Query 17917 GTCCGCTATTCTCCA 17931
||| |||||||||
Sbjct 504637 CTCCCTTATTCTCCA 504651
>seq179
Length=2312354
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/63 (90%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 157420 GTCTCAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAA 157479
|||| |||||||||||||||||||||||| ||||||||||| || |||| | ||||||||
Sbjct 786960 GTCT-AGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902
Query 157480 TCC 157482
|||
Sbjct 786901 TCC 786899
>seq3099
Length=1637421
Score = 82.4 bits (90), Expect = 9e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 157426 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCA 157483
||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||
Sbjct 1584998 GTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCATTGGTTCGAATCCA 1584941
>seq2951
Length=50933
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 16154 GGTGGTGGAATTGGTAGACACCCCAGACTTAAAAT-CTGTTGAGCGTATGCTCGTGCGGG 16212
||||||||||||||||||||| | |||||||||| |||| || |||| ||||||||
Sbjct 41485 GGTGGTGGAATTGGTAGACACGCAGGACTTAAAATCCTGTGGACATTATGTCCGTGCGGG 41426
Query 16213 TTCAAGTCCCGC 16224
||||||||||||
Sbjct 41425 TTCAAGTCCCGC 41414
>seq1702
Length=707479
Score = 82.4 bits (90), Expect = 9e-11
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 157426 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCAGC 157485
||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||
Sbjct 285448 GTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTGGGTTCGAATCCCGC 285389
>seq788
Length=584067
Score = 82.4 bits (90), Expect = 9e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 16154 GGTGGTGGAATTGGTAGACACCCCAGACTTAAAATCTGTTGAGC-GTATGCTCGTGCGGG 16212
||||||||||||||||||||| | ||||||||||| ||||| | |||||||||||
Sbjct 133179 GGTGGTGGAATTGGTAGACACGCAGGACTTAAAATCCTGTGAGCATTGCGCTCGTGCGGG 133120
Query 16213 TTCAAGTCCCGCTCG 16227
|||||||||||| ||
Sbjct 133119 TTCAAGTCCCGCCCG 133105
>seq126
Length=3533043
Score = 82.4 bits (90), Expect = 9e-11
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 157426 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAATCCAGC 157485
||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||
Sbjct 646251 GTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTGGGTTCGAATCCCGC 646310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596122404398720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |