Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq714 149 7e-31 >seq714 Length=734366 Score = 149 bits (164), Expect = 7e-31 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | ||||||||||| || |||| ||| |||||||| ||||||| |||||| || || Sbjct 47749 ATCTCTAATATATGTATCTATAAGTAGACTGTACATTTCTGAATGAACATTTTCCATTGC 47808 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||| ||||| ||||| |||||||| ||||| | | ||| || || | ||||||| Sbjct 47809 AATTTGAAAGCCATAGAAACATCTTGCTTCTGTGACTTGTACTTCTTGGCTGAATCTTTC 47868 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | | ||||| || ||||| ||||| || |||||||| ||||| || | | ||| Sbjct 47869 TACAAGGTTTTCATTTACAATTCCATCTGATGCTGCAAAGAATGCAAGTACGTGTGATAT 47928 Query 23952 AAAATGTCTTTCATCAGTTGATAATTTTTTCC 23983 ||||| ||||||||| ||| ||| ||||||| Sbjct 47929 GAAATGCCTTTCATCATTTG-TAAGTTTTTCC 47959 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 |||||||| ||||||||| || || || ||||||||||| | ||||| ||| || Sbjct 43904 TCATCCCTTGAAATCAATTCGTTGCTGAAAGTCAATCCTGGCATAAGTCCTCTTTTCTTC 43963 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || |||| |||||| ||||| |||||||||||||| || || ||||| || Sbjct 43964 AGCCAGAAAATTGAAGCAAAGCTCCCGGAGAAGAAAATACCCTCCACTGCAGCAAATGCT 44023 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 || | | ||| |||||||| ||| || | |||||| | | ||||| || Sbjct 44024 ACCACTCTCTCGCCATATGTTGCAGTATCATTTGCAATCCACTGAAGGGCCCAATCTGCT 44083 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750 ||| |||||||||| ||||||||||| || || || Sbjct 44084 TTCTTTTTTACACACGGCATTGTTTCAATAGCATTAAA 44121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521326390868800