Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq783 172 1e-37
seq2315 152 1e-31
seq242 116 9e-21
>seq783
Length=580412
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| ||||| || || ||||| ||||| || || || || |||||||
Sbjct 389904 CAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTCAGAC 389963
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||||||||||| || ||||| || || || ||||| ||
Sbjct 389964 ACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCAACAG 390023
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| || ||||| ||||||||| | || || |||| || ||| |
Sbjct 390024 AGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAACATT 390083
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| ||||| |||||||| ||| ||||
Sbjct 390084 CAAAAAGAATCTACACTTCATCTTGTGTTGCGACT 390118
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||||| || || ||||| || || | || || || || ||
Sbjct 390132 CAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTCGGAT 390191
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| |||||| || ||||||||||| ||||| || || || ||||| ||
Sbjct 390192 ACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 390251
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || |||||||| || || | |||||| | ||||| ||| |
Sbjct 390252 AGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAACATT 390311
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| |||||||| ||||| |||||||| |||||||
Sbjct 390312 CAGAAAGAATCTACACTCCATCTTGTGCTGAGACT 390346
Score = 131 bits (144), Expect = 4e-25
Identities = 141/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || ||||| ||||| |||||||| || || ||| |||||
Sbjct 387061 CAGATTTTCGTGAAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTCAGAT 387120
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || |||||||| |||||||| ||||| ||||| ||||| ||
Sbjct 387121 ACCATTGAGAACGTGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCAACAG 387180
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | ||||| ||||| || || | || || || |
Sbjct 387181 AGATTAATCTTTGCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAATATA 387240
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 387241 CAGAAAG 387247
Score = 131 bits (144), Expect = 4e-25
Identities = 141/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || ||||| ||||| | || || || ||||||
Sbjct 390360 CAGATTTTCGTGAAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCAGAC 390419
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| |||||||||||||| ||||| || || || ||||| ||
Sbjct 390420 ACGATCGAAAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAG 390479
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || ||||| || |||||||||||||| | || || || |
Sbjct 390480 AGATTGATCTTTGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAATATT 390539
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 390540 CAGAAAG 390546
>seq2315
Length=138946
Score = 152 bits (168), Expect = 1e-31
Identities = 146/187 (78%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||||||||| || || ||||| || ||||| ||||||||| || ||
Sbjct 26781 CAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATCTGAT 26840
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| || ||| ||| ||||| |||||||| || || ||||| || |||||
Sbjct 26841 ACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCAGCAG 26900
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || |||||||| ||||||||| | || ||| | || |||||| |
Sbjct 26901 AGATTGATTTTCGCAGGGAAACAGCTGGAAGATGGACGCACACTTTCAGACTATAACATT 26960
Query 178104 CAAAAAG 178110
|||||||
Sbjct 26961 CAAAAAG 26967
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | |||||||| || || || | || |||||| |||||
Sbjct 32996 CAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTCAGAT 33055
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| || ||| ||||||||| || || || ||||||||||| ||||||||
Sbjct 33056 ACCATTGAGAATGTAAAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCAGCAG 33115
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || || ||||||||||| ||||| | || ||| | ||||| || |
Sbjct 33116 AGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCGCACACTTTCAGATTACAATATT 33175
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||||| || || |||||| | |||
Sbjct 33176 CAGAAAGAGTCTACTCTGCATTTGGTT 33202
Score = 136 bits (150), Expect = 1e-26
Identities = 123/155 (79%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || |||||||||||||| ||||| || ||||| ||| || ||
Sbjct 28964 CAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCTGAT 29023
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||||||| ||||||||||||||||| || ||||||||
Sbjct 29024 ACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAGCAG 29083
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
||| | || || || ||||||||| | ||||||||
Sbjct 29084 CGATTAATTTTTGCAGGAAAACAGTTGGAAGATGG 29118
Score = 127 bits (140), Expect = 5e-24
Identities = 121/155 (78%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || |||||||||||||| ||||| || ||||| ||| || ||
Sbjct 27523 CAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCTGAT 27582
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||||||| ||||||||||||||||| || || |||||
Sbjct 27583 ACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 27642
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
||| | || || || || |||||| | ||||||||
Sbjct 27643 CGATTAATTTTTGCAGGCAAACAGTTGGAAGATGG 27677
Score = 125 bits (138), Expect = 2e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || |||||||| ||||| ||||| || ||||| ||| || ||
Sbjct 28025 CAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCTGAT 28084
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||| ||||| ||||||||||||||||| || || |||||
Sbjct 28085 ACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 28144
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | || || || || |||||| | |||||||| | || || | || || || ||
Sbjct 28145 CGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAATATC 28204
Query 178104 CAAAAAG 178110
|||||||
Sbjct 28205 CAAAAAG 28211
>seq242
Length=1788442
Score = 116 bits (128), Expect = 9e-21
Identities = 138/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||||||| | || || ||||| || ||||||||||| ||| ||| ||
Sbjct 1569780 CAGATATTCGTGAAAACTTTAACGGGTAAAACAATTACCCTCGAGGTTGAAGCCTCTGAT 1569839
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || ||||| ||||| |||||||| || || ||
Sbjct 1569840 ACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAGGAAGGCATCCCTCCTGATCAACAG 1569899
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || ||||| ||||| || |||||| | || || | |||||||| |
Sbjct 1569900 AGATTGATTTTTGCTGGAAAGCAGCTAGAGGATGGACGAACACTCTCTGATTATAATATT 1569959
Query 178104 CAAAAAG 178110
|| ||||
Sbjct 1569960 CAGAAAG 1569966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203348837793648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |