Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq320 87.8 1e-12 >seq320 Length=1637695 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 18625 TAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCG 18684 ||||||||||||| || |||||||||| || ||||| ||||||||||||||||| | | Sbjct 153411 TAACTACAAAGCGAGTATTTTGGAGGGGTGTAGTGGAGGAGTTGTTATGGTTTATTAGAG 153470 Query 18685 GGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGAT 18744 | || || || |||||||| | || ||| | |||||||||||| | || | | Sbjct 153471 GATCGACAAATGCCAAAGAATTAAGTCAAAAGGATGTCCACATATGGGATGCAAACAGTT 153530 Query 18745 CGAGCAAATTTCTAAATAGGAATGGCTTC-CATAAAAGACACACGGGGGACCTTGGCCCC 18803 | || | || ||| | ||||||| || | | || | | || || | || || Sbjct 153531 CACGCGAGTTCCTAGACTCTTGTGGCTTCACAGATAGGAAAGA-AGGAGATTTAGGACCT 153589 Query 18804 ATTTACGGCTTCCAGTGGAGACATTTTGGAGC 18835 |||| || || || |||||||| | ||| || Sbjct 153590 GTTTATGGATTTCAATGGAGACACTATGGTGC 153621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399476933479155