Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq320 87.8 1e-12
>seq320
Length=1637695
Score = 87.8 bits (96), Expect = 1e-12
Identities = 170/245 (69%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818
|| || | |||| ||||||| | |||||| || || |||||||| || || | |||
Sbjct 153988 TGTGCCAGCATGTAAGTTAACAAAGAATAAGATGCGATATTAAATGGTACGCCAAGACCC 153929
Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG- 101877
|| ||||| ||||||||| ||||| || || | || ||||| |||||||||||
Sbjct 153928 ATGTCAGCGCTTCTTTGATAAAGTTGGCATGATAACTCTCCATTGTTTACATAAAATTGT 153869
Query 101878 ACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCAC 101936
|| || ||| ||||| || || | ||||||| | |||||| ||||| ||
Sbjct 153868 AC--AAGACAGTGACAGGGAGGTAGAGCCATTTTTGAAATGTCGCCTGGGTTCCATGCTG 153811
Query 101937 ACATTAACATCCTTCTATCTGTAGG-GTTTGTTTTTATAGTATCAATCAACTGTTTTAAT 101995
|||||| || | ||||| | || | || || ||| |||| || | |||||||||
Sbjct 153810 ACATTACAATTCGCCTATCATTGGGAGAATG-TTGTATCTTATCTATGATCTGTTTTAAC 153752
Query 101996 TGGTC 102000
|| ||
Sbjct 153751 TGATC 153747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361226725118309
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |