Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq3883 122 1e-22 >seq3883 Length=158444 Score = 122 bits (134), Expect = 1e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 65946 GATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAG 66005 ||||| || || || || || || ||||| ||||||||| |||||| | ||||| Sbjct 116556 GATTGAGTAAACGTCCGAGTAATGACGTCTTTTTGTTGCTCTTTAGTTAAAGAGTTAAAA 116497 Query 66006 CGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATT 66065 |||||||||||||| |||||||| || |||| ||| ||||| ||||| ||||| | ||| Sbjct 116496 CGTACGGCATAACCAGAAACACGAATAGTTAATTGTGGATACTTTTCAGGATTTTCCATT 116437 Query 66066 GCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCAACA 66125 |||||| | || | || | | || || || || || ||||||||||||||||| Sbjct 116436 GCATCTAATAATGTTTCACGATTTAATACGTTAACATTAAGGTGCTGACCACCTTCAACT 116377 Query 66126 GT 66127 || Sbjct 116376 GT 116375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555324609199640