Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq503 87.8 2e-12 >seq503 Length=216272 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAAT 20062 ||| || || ||||| |||||||| |||||||| | ||| | | |||||||||| Sbjct 160628 ATGCAGGGTTGATTCCTTTTGTATATTGTAATCAG--AAAGTGTGCGCCCATCTTCCAAT 160571 Query 20063 TGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATT 20122 ||||| || ||| | || | ||||||||| || || | |||||||| || ||| Sbjct 160570 TGTTTACCAGCAAAGATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATC 160511 Query 20123 TTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCG 20182 ||| |||||| | ||| | |||| || ||| ||| | ||| || ||||| || Sbjct 160510 TTTGCTTTCACGTTCTCAATTGTATCGGAAGCTTCAACTTCAAGGGTGATAGTTTTTCCT 160451 Query 20183 GTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||| || || ||||| Sbjct 160450 GTCAGTGTCTTGACGAAGATCTGCAT 160425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419558772836079