Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq5551 91.5 5e-14 >seq5551 Length=12233 Score = 91.5 bits (100), Expect = 5e-14 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 30473 AAAGATAGCCGCGCTATTTACGCCCGTATTGCCTATGAAA--TGTTCT-TCCGCGTTGAC 30529 ||||| | ||| || ||||| ||| | || | ||||||| | || | |||| |||| Sbjct 11173 AAAGACACCCGAGCCATTTATGCCAGAATAGTGTATGAAAAATATTTTATCCG---TGAC 11117 Query 30530 CCTCGGTGGAAGAATGTTGATGAGGATGTATTCTTCATGGAGATTCTCGGCCATGACGAT 30589 || ||||| ||||||||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 11116 AAACGTTGGAAAAATGTTGATGAAGATGTCTTCTTTGCTGAAATTCTTGGTCATGATGAT 11057 Query 30590 GAAAACACCCAACTGCACTATAAGCAGTTTAA 30621 ||| | || |||||| ||||||| || ||||| Sbjct 11056 GAACAAACGCAACTGTACTATAAACAATTTAA 11025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164990707728754