Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_008193.1 Length=30505 Score E Sequences producing significant alignments: (Bits) Value seq1913 116 7e-22 seq916 91.5 3e-14 seq3883 80.6 5e-11 >seq1913 Length=212763 Score = 116 bits (128), Expect = 7e-22 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1269 GGCGCGAAATGTGCATACTTCATTGTCATTTCAATTGTTGAGTGTCCGAGAATCTCTTTT 1328 ||||| || |||||||| ||| ||||||| || || ||| ||||| || | || | Sbjct 83254 GGCGCAAAGTGTGCATATCGCATGGTCATTTTGATATCTGTGTGGCCGAGTATTTTTTGT 83195 Query 1329 AATACTAAAATGTTTCCCCCGTTCATCATAAAATGACTGGCGAAAGTATGGCGTAAAACG 1388 || ||||||||||| || || |||||||||||||| |||||||| ||||||||||| ||| Sbjct 83194 AAAACTAAAATGTTACCACCATTCATCATAAAATGGCTGGCGAAGGTATGGCGTAATACG 83135 Query 1389 TGCGTAAGCTGTCCTTTCGGCAAATCAATACCCGCCCGATCTACTGC 1435 || || | |||| || || | || || | || ||||| | ||| Sbjct 83134 TGGGTTAATTGTCGTTCGGGTAGTTCTATTGCTGCACGATCGATTGC 83088 >seq916 Length=289624 Score = 91.5 bits (100), Expect = 3e-14 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 1310 GTGTCCGAGAATCTCTTTTAATACTAAAATGTTTCCCCCGTTCATCATAAAATGACTGGC 1369 ||| ||||| || | || ||| |||||||||||||| ||||||||||| ||||| ||| | Sbjct 65588 GTGGCCGAGTATTTTTTGTAAAACTAAAATGTTTCCGCCGTTCATCATGAAATGGCTGAC 65647 Query 1370 GAAAGTATGGCGTAAAACGTGCGTAAGCTGTCCTT 1404 ||| || |||||||| ||||| || | |||| || Sbjct 65648 GAATGTGTGGCGTAATACGTGGGTTAATTGTCGTT 65682 >seq3883 Length=158444 Score = 80.6 bits (88), Expect = 5e-11 Identities = 109/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1269 GGCGCGAAATGTGCATACTTCATTGTCATTTCAATTGTTGAGTGTCCGAGAATCTCTTTT 1328 || || || || ||||| |||||||| || ||| | || || | || | || | Sbjct 35029 GGTGCAAAGTGAGCATAACGCATTGTCACTTTAATATCAGTATGCCCTAATATTTTTTGT 34970 Query 1329 AATACTAAAATGTTTCCCCCGTTCATCATAAAATGACTGGCGAAAGTATGGCGTAAAACG 1388 | ||| | || || || ||||||||||||||||| |||||||| || ||||||| ||| Sbjct 34969 AGTACCAGTATATTGCCGCCGTTCATCATAAAATGGCTGGCGAATGTGTGGCGTAGTACG 34910 Query 1389 TGCGTAAGCTGTCCTTTCGGCAAATCAATACC 1420 ||||| | || || | || || |||||||| Sbjct 34909 TGCGTTAATTGGCCGTCTGGTAATTCAATACC 34878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97487964089986