Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq2372 114 1e-20 >seq2372 Length=84335 Score = 114 bits (126), Expect = 1e-20 Identities = 224/331 (68%), Gaps = 0/331 (0%) Strand=Plus/Plus Query 142009 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCA 142068 ||||| ||||| |||||||| | |||||| | | || || || || || || | || Sbjct 73776 TTTTCTACTTCTAAATGCCATAACGGATAAAATACCGTTGCCGCCCCCCCGCGTACCCCG 73835 Query 142069 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 142128 ||||| ||||| ||||| ||||| || ||||| | || | ||||||||| ||| ||| Sbjct 73836 CCTTGAGAACAGGATTTCACAGCTGTTTGGAAGTACTTATAAAATGGAATACAACCAGTA 73895 Query 142129 TGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 142188 || |||| || || || || ||| ||||| ||| |||| | || || Sbjct 73896 TGGAACGCTTCGCCACCGCGGATCGGACTTCCTAAGGCACGGATCTTACCGGCATTAATG 73955 Query 142189 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTGGCAGTTTTGTTAATAGAT 142248 ||||| || || |||| || | ||||| || || | | | || || ||||| || Sbjct 73956 CCAATTCCAGCGCGTTGTGATACGTATTTAACAATAGCGCTCGCGGTGGCATTAATTGAG 74015 Query 142249 TTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGAGTTGGAGTACGT 142308 | || || | ||||| | ||||| |||||||| || ||||||||||| || Sbjct 74016 TCAAGACTATCATCGCACTCAATCAATACACACGAACTAAACTGGCGAGTTGGAGTGCGC 74075 Query 142309 GCACCAGCCATAATAGGAGTAGGCAACGAAA 142339 | || |||||||| || ||||| | |||| Sbjct 74076 ACCCCCGCCATAATTGGCGTAGGTAGGGAAA 74106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545507691400120