Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq1913 89.7 1e-13 >seq1913 Length=212763 Score = 89.7 bits (98), Expect = 1e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 32929 CCTTCTATATAAACCTGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTT 32988 ||||| |||||||| || || || || | || || || |||| ||| || | | Sbjct 142415 CCTTCAATATAAACTTGTGAACCACGGCGTAAGTATTCACCAGCAATTTCTGCTAATCGA 142474 Query 32989 CCGAAGATAACAACTCGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCT 33048 || || |||||||| || ||||||||||| |||||||| || || |||||||| ||| Sbjct 142475 CCAAAAATAACAACGCGGTGCCATTCAGTGCGTTCTTTCGGCTCGCCGGTTTGCTTATCT 142534 Query 33049 TTCCACTGCTCAGATGTTGCAACA 33072 |||||| ||| || || |||||| Sbjct 142535 TTCCACGTCTCCGACGTCGCAACA 142558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144032091363854