Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq2372 91.5 2e-13 >seq2372 Length=84335 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 148003 ATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTGATGTGGTTTCAGTAATT 148062 |||||||| || || |||| || || ||||| |||||||| | ||| || ||||| Sbjct 73953 ATGCCAATTCCAGCGCGTTGTGATACGTATTTAACAATAGCGCTCGCGGTGGCATTAATT 74012 Query 148063 GATTCTAAA---TCGTCGCCAGTTTCAATCAATACACACGAACTGAATTGACGTGTTGGA 148119 || || | | || |||| |||||||||||||||||||| || || || |||||| Sbjct 74013 GAGTCAAGACTATCATCGCAC---TCAATCAATACACACGAACTAAACTGGCGAGTTGGA 74069 Query 148120 GTCCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAATTGCGATGCAGCATCA 148179 || || || || || | ||| || || || | |||||| || || |||||| Sbjct 74070 GTGCGCACCCCCGCCATAATTGGCGTAGGTAGGGAAATTTTAAAGGTGGAAATCGCATCA 74129 Query 148180 TAAAAATCTTTGATGTA 148196 |||||| ||| ||||| Sbjct 74130 TAAAAACGTTTAATGTA 74146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543664619479480