Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_016163.1 Length=262391 Score E Sequences producing significant alignments: (Bits) Value seq3883 86.0 1e-11 >seq3883 Length=158444 Score = 86.0 bits (94), Expect = 1e-11 Identities = 93/122 (76%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 67711 GGTTCGACTCCCTCCGTCCCGACCAAATTAATTT----ATGCGAATGTGGCGAAATTGGT 67766 ||||||| |||| ||| | |||| |||| | ||||| ||||||||||||||| Sbjct 133373 GGTTCGAATCCCGTCGTAGCCACCA--TTAAGATTAGAATGCGGGTGTGGCGAAATTGGT 133430 Query 67767 AGACGCCCCAGATTTAGGTTCTGGTATCGAAAGGTGTGTGGGTTCGACTCCCTCCATTCG 67826 |||||| ||||||||||||||||| || ||| ||||| |||| | || ||||| || Sbjct 133431 AGACGCACCAGATTTAGGTTCTGGCGCCGCGAGGCGTGTGAGTTCAAGTCTCTCCACCCG 133490 Query 67827 CA 67828 || Sbjct 133491 CA 133492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839464863631640