Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq2372 96.9 3e-15 >seq2372 Length=84335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 117826 CATATACTGAGTGCCGGACAAATGCAAGGCTTCATCACGGGCAATCAGTTCAATAATGTT 117885 |||| | ||||| |||| | || | |||||||| ||||||||||||| |||||| || Sbjct 71596 CATAAATTGAGTACCGGTAAGGTGAAGAGCTTCATCGCGGGCAATCAGTTTAATAATTTT 71655 Query 117886 GGTGTTGCCCAGCATTACCCCGCGCTCGCCGAACGCAAATGAGCAGGCGAAGCTCACGTA 117945 || || || ||||| |||| ||| | || ||||| |||||||| ||||| || || Sbjct 71656 GGCATTTCCTTCCATTAATTCGCGTTCGGCAAAGGCAAACGAGCAGGCAAAGCTAACATA 71715 Query 117946 GAAGCGGATCGCTTCCAGTGCGTTGA 117971 || || || ||||| || || |||| Sbjct 71716 AAATCGAATAGCTTCAAGCGCATTGA 71741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477512416550120