Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_018859.1 Length=77315 Score E Sequences producing significant alignments: (Bits) Value seq3995 86.0 3e-12 >seq3995 Length=10512 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 67596 ATCTTAGGGACATATGGTGCACCCTACAGGATTCGAACCTGTAACCAACGACTTAGAAGG 67655 |||||||| |||| | ||||||||||||||||||||| ||| ||| ||||||||| Sbjct 8940 ATCTTAGGTTTTAATGGCGTCCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGG 8999 Query 67656 TCGCTGCTCTATCCA-TTGAGCTAAGG 67681 || ||||||||||| |||||||||| Sbjct 9000 CCGTTGCTCTATCCAGCTGAGCTAAGG 9026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247266446485924