Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq321 87.8 2e-12 >seq321 Length=2405511 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 197101 AAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCAC 197159 |||||| | || |||||||| || || ||||| ||| | |||| || || || || Sbjct 931462 AAGAAATCCTCCATAGGTTCCTGTCCTTTTTCCTTTCCCTATATAGCCACCAATGACAAC 931403 Query 197160 CAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCT 197219 || || | || |||| ||| ||||| | ||||||||||||| ||| | ||| | | Sbjct 931402 CACGTCTAATGTATCGCCCACACCTTCTAAATAATCTTTCTTCAATTTTAACCAATTCCG 931343 Query 197220 AGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTC 197279 ||| | ||| |||||||| || ||||| | || | |||||| | ||| | ||||| Sbjct 931342 AGAACGCTTAGCAATCTCATATGTTGCATCCTGTTCTAAGGTCTTCACCATAAGGCCCTC 931283 Query 197280 GCAAT 197284 ||||| Sbjct 931282 GCAAT 931278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676682575751920