Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq2372 123 3e-23 >seq2372 Length=84335 Score = 123 bits (136), Expect = 3e-23 Identities = 326/498 (65%), Gaps = 0/498 (0%) Strand=Plus/Minus Query 94810 ATTATTCGTTTTTATGATGCTGTAAGTACCCGTCAGGTTTCATTACCAACTCCTATTATG 94869 |||| |||||||||||||| | ||| | | |||| |||| || || |||||| Sbjct 74143 ATTAAACGTTTTTATGATGCGATTTCCACCTTTAAAATTTCCCTACCTACGCCAATTATG 74084 Query 94870 GCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGGTTATTGAAGCAGGCGAC 94929 || || | || || ||||| || || |||||||| ||||| | ||||| | || Sbjct 74083 GCGGGGGTGCGCACTCCAACTCGCCAGTTTAGTTCGTGTGTATTGATTGAGTGCGATGAT 74024 Query 94930 TCACTGAAATCTATTAACAAAACTGCTAACTCAATAATTGAATACATTTCTAAACGTGCC 94989 || | || ||||| || || | | | || || ||||| | || |||| || Sbjct 74023 AGTCTTGACTCAATTAATGCCACCGCGAGCGCTATTGTTAAATACGTATCACAACGCGCT 73964 Query 94990 GGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCTCGTATTGGCATGGGCGAA 95049 || ||||| || || | |||| ||| ||||| ||| || || || |||||| Sbjct 73963 GGAATTGGCATTAATGCCGGTAAGATCCGTGCCTTAGGAAGTCCGATCCGCGGTGGCGAA 73904 Query 95050 GTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAATCATGT 95109 | ||||| ||| ||||||||| | || | ||||| || ||||| ||||| ||| Sbjct 73903 GCGTTCCATACTGGTTGTATTCCATTTTATAAGTACTTCCAAACAGCTGTGAAATCCTGT 73844 Query 95110 TCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAA 95169 || ||||| || | || || || || || || | | |||||| | |||||||| ||| Sbjct 73843 TCTCAAGGCGGGGTACGCGGGGGGGCGGCAACGGTATTTTATCCGTTATGGCATTTAGAA 73784 Query 95170 GTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATTCGCCAT 95229 || ||||| | | || || || ||| ||| | || || || || | |||||| Sbjct 73783 GTAGAAAACTTATTGGTGCTACGCAATAACCGTGGTATTGAAGAAAATCGCGTGCGCCAT 73724 Query 95230 ATGGACTACGGAATCCAGATGAACGACCTTATGATGGAACGTTTCGGTAAAAATGATTAC 95289 | || || || | || || || | | ||| | ||||| |||||| || | Sbjct 73723 TTAGATTATGGGGTACAAATTAATAAATTAATGTACCAGCGTTTAATTAAAAACGAAAAT 73664 Query 95290 ATCACGTTGTTTAGTCCT 95307 ||| || ||||||| ||| Sbjct 73663 ATCTCGCTGTTTAGCCCT 73646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537645837738640