Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq3995 87.8 6e-13 >seq3995 Length=10512 Score = 87.8 bits (96), Expect = 6e-13 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 44200 TTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAATCCTGT 44259 |||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 9024 TTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCTGT 8965 Query 44260 ACGGGGTGCCA 44270 | ||| |||| Sbjct 8964 AGGGGACGCCA 8954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157915974784816