Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq911 141 1e-28 >seq911 Length=74078 Score = 141 bits (156), Expect = 1e-28 Identities = 216/308 (70%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGA 122421 |||| |||||||||||| ||| ||| | ||| ||| |||| | ||| |||| Sbjct 47483 CATGCAACAATATCTGGCTTTAATGCAAAAAATTCTTGATGACGGTGTGGCGAAATCAGA 47424 Query 122422 CCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAA 122481 || || || ||||| | || | || || |||||||||||| | |||| | Sbjct 47423 TCGCACTGGGGTTGGCACTTTATCCATTTTTGGTCATCAAATGCGCTTTAATTTGCAGCA 47364 Query 122482 AGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCT 122541 ||| || ||||| ||||| || ||||| ||| || || || || || ||||| | || Sbjct 47363 AGGCTTTCCGCTCGTCACCACAAAAAAATGTCATCTACGTTCTATTATTCATGAATTACT 47304 Query 122542 GTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 122601 ||||| | | ||||| ||||| || ||||| | ||||| || |||| |||||| Sbjct 47303 TTGGTTTTTAAAAGGCGAAACCAATATTGCTTATCTACATGACAATAATGTCACTATCTG 47244 Query 122602 GGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTGA 122661 |||||| ||||| ||| || | ||| |||| || || || || ||||| |||||||||| Sbjct 47243 GGATGAGTGGGCCGATAAAAACGGTGATCTAGGACCCGTTTATGGTAAACAATGGCGTGC 47184 Query 122662 GTGGCCAG 122669 |||| || Sbjct 47183 TTGGCAAG 47176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777577964296400