Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2372 98.7 1e-15 >seq2372 Length=84335 Score = 98.7 bits (108), Expect = 1e-15 Identities = 202/297 (68%), Gaps = 9/297 (3%) Strand=Plus/Plus Query 64089 ATTGAGACCAATCATCGAACCATCCTTGAACAGATACTCTGCCCAAAGTTTTTCTTGATT 64148 ||| ||||| ||||| || || | ||||| || || |||||| ||| |||||||| Sbjct 71440 ATTTAGACCGATCATTGATCCGCCTGAAAACAGGTAATCCGCCCAATCTTTCTCTTGATT 71499 Query 64149 TACAGTTTTCTCAAAAGTATTGATTAACCACTGCTCTTCT---TCTTTGAAGATTTGTGC 64205 | | | || |||| || || | ||||| | || ||||| ||| | || Sbjct 71500 TGCTGCTTGGACAAACAGATC-AT--AGCACTGTTGTTGGCACTCTTTAGCGATATCAGC 71556 Query 64206 CATCTCAGGATCATCACCTTCTCTCC---ACTTCTTCAGAATATTCTGAGTAATGGCAAG 64262 ||| || |||||||| | | || | || | || | ||| |||||| || ||| Sbjct 71557 CATTTCTGGATCATCTTCACCACTGCGTAACGTATTAATCATAAATTGAGTACCGGTAAG 71616 Query 64263 GTGTTGATTCTCATCTCTGGCAATCAGTGAGATGATCTTTGCACTTCCTTCCATAAGTTT 64322 ||| || ||||| | |||||||||| || || || ||| |||||||||| | || Sbjct 71617 GTGAAGAGCTTCATCGCGGGCAATCAGTTTAATAATTTTGGCATTTCCTTCCATTAATTC 71676 Query 64323 GAGTTCGCCAAAAGCAAAACTGCAAGCAAATGATACGTAAAATCGAATACCTTCAAG 64379 | ||||| |||| ||||| ||| ||||| || |||||||||||| ||||||| Sbjct 71677 GCGTTCGGCAAAGGCAAACGAGCAGGCAAAGCTAACATAAAATCGAATAGCTTCAAG 71733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665448156457880