Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_020863.1 Length=129155 Score E Sequences producing significant alignments: (Bits) Value seq1913 127 2e-24 >seq1913 Length=212763 Score = 127 bits (140), Expect = 2e-24 Identities = 224/321 (70%), Gaps = 4/321 (1%) Strand=Plus/Minus Query 104307 TTTATCATAGTTAAGGATATCAGGGTAAAGTCGTTTACTTGAGCATTCTAGAGCTAGTTG 104366 || |||||| |||||||||||||| || | ||||||| | || |||| |||| ||| Sbjct 32562 TTGATCATAATTAAGGATATCAGGATACATTCGTTTAGCGGCACACTCTAATGCTAATTG 32503 Query 104367 TTTGATATCATAATTTGGATCTTCTGGTTTGTGATTAATACCGTCTCTCA-CGCTATAAA 104425 ||| || ||||||| ||||| ||| || ||||||| || ||| | | ||| | | | Sbjct 32502 TTTAATCGTATAATTTTGATCTGTTGGCTTATGATTAACCCCATCTTTGATCGCAA-AGA 32444 Query 104426 TTAGTTTAGGAAAAACAGGTGTAACTTTATTCTTACCTAATCCGTCAATTTGAACTTGTA 104485 || |||||||||||| | || | ||| || ||||| || |||| | || ||| Sbjct 32443 CTAATTTAGGAAAAACTGCCGTTTTATGATTTTTTCCTAAACCAACAATACGCACACGTA 32384 Query 104486 AAATCATTTCTTGGATTAATTTTGCTTCCCATGATGTTCCTAAACCAAAGCCCACAGAAA 104545 | ||| |||||| ||||| || |||||| || ||||||||||| || | | || Sbjct 32383 AGATCGATTCTTGAATTAAGCGTGATTCCCAACTGGTGCCTAAACCAAATCCAAATGTAA 32324 Query 104546 TAAAGGGTGATTGTCCACTTG-TGCAAGTCATACTATTCACCTGATATAGAAAAGTTTGA 104604 ||| || | |||||| | | | | || | |||| || | |||| || | |||| Sbjct 32323 CAAAAGGGGTCTGTCCATTCGCAGTATGT-AGCGTATTGACTTCATATTCTAACGATTGA 32265 Query 104605 CATGCATCATAAACATCTTTT 104625 ||||||||||| |||||| Sbjct 32264 AATGCATCATAACACTCTTTT 32244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413143207522084