Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq3883 82.4 4e-11 seq3267 82.4 4e-11 >seq3883 Length=158444 Score = 82.4 bits (90), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGC--TTATAGCTGTACGAGTT 63170 ||||||||||||||||||||||||||||||||||||||| | || | | || |||||| Sbjct 4313 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGACCTTTTTGGTCGTGCGAGTT 4254 Query 63171 CGAGTCTCG 63179 | ||||||| Sbjct 4253 CAAGTCTCG 4245 >seq3267 Length=144362 Score = 82.4 bits (90), Expect = 4e-11 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGC--TTATAGCTGTACGAGTT 63170 ||||||||||||||||||||||||||||||||||||||| | || | | || |||||| Sbjct 87507 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGACCTTTTTGGTCGTGCGAGTT 87448 Query 63171 CGAGTCTCG 63179 | ||||||| Sbjct 87447 CAAGTCTCG 87439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230573177536741