Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq503 197 3e-45 seq2682 167 5e-36 seq739 165 2e-35 seq129 154 3e-32 seq1081 147 4e-30 seq51 116 7e-21 seq317 107 4e-18 >seq503 Length=216272 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| ||| || || | ||||| || ||||| || |||||||| |||||||| Sbjct 162318 CCTCCTCTCAGACGAAGTACAAGATGCAGGGTTGATTCCTTTTGTATATTGTAATCAGAG 162259 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| ||||| |||||||||||||| | ||||||||| |||||||| Sbjct 162258 AGTGTGCGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 162199 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || |||||||| ||||||||||||||||| |||||||| || ||| ||| Sbjct 162198 ATTCCTTCTTTGTCTTGAATTTTTGCTTTTACATTTTCTATCGTATCGGAAGCTTCAACT 162139 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || ||||| | ||||| || || || ||||| Sbjct 162138 TCAAGTGTGATAGTTTTTCCTGTAAGGGTCTTCACGAAAATTTGCAT 162092 Score = 190 bits (210), Expect = 4e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| ||| || || | ||||| || ||||| || |||||||| |||||||| Sbjct 160651 CCTCCTCTCAGACGAAGTACAAGATGCAGGGTTGATTCCTTTTGTATATTGTAATCAGAA 160592 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| | |||||| ||||||||||| | || ||||| |||||||| Sbjct 160591 AGTGTGCGCCCATCTTCCAATTGTTTACCAGCAAAGATCAACCTCTGTTGGTCTGGAGGA 160532 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| |||||||||||||||||||| || || ||||| ||||| || ||| ||| Sbjct 160531 ATACCTTCTTTATCTTGAATCTTTGCTTTCACGTTCTCAATTGTATCGGAAGCTTCAACT 160472 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTAT 82816 || | || || || || ||||||| ||||| || || |||||||| ||||| Sbjct 160471 TCAAGGGTGATAGTTTTTCCTGTCAGTGTCTTGACGAAGATCTGCATGATTAT 160419 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| | ||| ||||| ||||| ||||| || || ||||| | Sbjct 161109 TACCACCACGAAGACGAAGAACAAGGTGGAGAGTTGATTCCTTCTGAATGTTGTAATCTG 161050 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 |||| | | || ||||| |||||||| || ||||| || | ||| ||||||||||| | Sbjct 161049 ATAGTGTGCGTCCATCTTCCAGTTGTTTACCCGCAAAAATCAATCTCTGTTGATCTGGCG 160990 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||||||||||||||| ||||||||||||||||| ||||| || || ||| | Sbjct 160989 GAATTCCTTCCTTATCTTGAATTTTTGCTTTTACATTTTCTATCGTGTCGGAAGCTTCAA 160930 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || || || ||||| | ||||| || || || ||||| Sbjct 160929 CTTCAAGTGTGATAGTTTTTCCTGTAAGGGTCTTCACGAAAATTTGCAT 160881 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| ||||| |||||||| || |||||||| || || || | | ||| Sbjct 161850 CGAAGAACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAGTCTGACAGCGTGCGTCCG 161791 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | |||||| ||||| ||||| | ||| ||||||||||| || || ||||| ||| Sbjct 161790 TCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGCGGAATACCTTCTTTA 161731 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||||||||| || || || || ||||||| ||||||| Sbjct 161730 TCCTGAATCTTGGCCTTGACATTTTCAATAGTGTCTGAAGCCTCAACTTCCAGAGTTATC 161671 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || ||||| | || |||||||| || |||||| Sbjct 161670 GTTTTTCCTGTAAGGGTTTTTACAAAAATTTGCATT 161635 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| ||||| |||||||| || |||||||| || || || | | ||| Sbjct 162078 CGAAGAACAAGGTGAAGAGTCGATTCTTTTTGAATATTATAGTCTGACAGCGTGCGTCCG 162019 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | |||||| ||||| ||||| | ||| ||||||||||| || || ||||| ||| Sbjct 162018 TCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGCGGAATACCTTCTTTA 161959 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||||||||| || || || || ||||| | ||||||| Sbjct 161958 TCCTGAATCTTGGCCTTAACATTTTCAATAGTGTCTGAAGCCTCAACTTCTAGAGTTATC 161899 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| | ||||| || || || ||||| Sbjct 161898 GTTTTTCCTGTAAGGGTCTTGACGAAAATTTGCAT 161864 Score = 156 bits (172), Expect = 8e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| ||||| ||||| || || |||||||| || || || | | ||| Sbjct 160867 CGAAGAACAAGGTGAAGAGTCGATTCCTTTTGAATATTATAGTCTGACAGCGTGCGTCCG 160808 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | |||||| ||||| ||||| | ||| |||||||| || || || ||||| ||| Sbjct 160807 TCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCGGGTGGAATACCTTCTTTA 160748 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||||||||| || || | || ||||| | ||||||| Sbjct 160747 TCCTGAATCTTGGCCTTGACATTTTCAATAGTGTCTGATGCCTCAACTTCTAGAGTTATC 160688 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || ||||| | ||||| || || || |||||| Sbjct 160687 GTTTTTCCTGTAAGGGTCTTGACGAAAATTTGCATT 160652 Score = 93.3 bits (102), Expect = 8e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | ||| ||||| | || ||||| ||||| || || |||||||| || || Sbjct 161634 CCTCCTCTGAGACGAAGAACAAGATGAAGAGTCGATTCCTTTTGAATATTATAGTCTGAC 161575 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGG 82699 || | | |||||||| | |||||| ||||| ||||| | |||||||||||| || Sbjct 161574 AGCGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAATCTTTGTTGATCCGG 161519 >seq2682 Length=416 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | ||| ||||| | || ||||| ||||| || || |||||||| || || Sbjct 94 CCTCCTCTGAGACGAAGAACAAGATGAAGAGTCGATTCCTTTTGAATATTATAGTCTGAC 153 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | |||||||| | |||||| ||||| ||||| | ||| |||||||| || || Sbjct 154 AGCGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCACTCTCTGTTGATCGGGTGGA 213 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||| |||||||| || || ||||||||||| || || || || ||| Sbjct 214 ATACCTTCTTTATCCTGAATCTTGGCCTTGACATTTTCAATAGTGTCTGAAGCCTCAACT 273 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||||||||| || ||||| | ||||| || || || ||||| Sbjct 274 TCTAGAGTTATCGTTTTTCCTGTAAGGGTCTTGACGAAAATTTGCAT 320 >seq739 Length=1399493 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 7012 ACTAAATGGAGCGTGGACTCTTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 6953 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || ||||| ||||||||||| | | || || |||||||| || ||||| || ||||| Sbjct 6952 AGCTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCTTCTTTGTCTTGG 6893 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| ||||| ||||| || || || ||| || ||| ||||| | ||| || || || Sbjct 6892 ATCTTAGCTTTCACATTCTCTATTGTGTCAGAAGCTTCAACTTCAAGAGTAATAGTTTTC 6833 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| || || |||||||| Sbjct 6832 CCTGTTAAGGTCTTAACGAAGATCTGCAT 6804 Score = 163 bits (180), Expect = 6e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 7468 ACTAAATGGAGCGTGGACTCTTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 7409 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||||||| ||||||||||| | | || || |||||||| || || || || ||||| Sbjct 7408 AGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGG 7349 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| || || ||||| || || || ||| || |||||||||||| || || || || Sbjct 7348 ATCTTAGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTTTTA 7289 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || || ||||| ||||||||| Sbjct 7288 CCAGTAAGTGTTTTGACAAAGATCTGCATT 7259 Score = 163 bits (180), Expect = 6e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 7696 ACTAAATGGAGCGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 7637 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||||||| ||||||||||| | | || || |||||||| || || || || ||||| Sbjct 7636 AGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGG 7577 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| || || ||||| || || || ||| || |||||||||||| || || || || Sbjct 7576 ATCTTAGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTTTTA 7517 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || || ||||| ||||||||| Sbjct 7516 CCAGTAAGTGTTTTGACAAAGATCTGCATT 7487 Score = 163 bits (180), Expect = 6e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 7924 ACTAAATGGAGTGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 7865 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||||||| ||||||||||| | | || || |||||||| || || || || ||||| Sbjct 7864 AGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGG 7805 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| || || ||||| || || || ||| || |||||||||||| || || || || Sbjct 7804 ATCTTAGCCTTCACATTCTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTAATGGTTTTA 7745 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || || ||||| ||||||||| Sbjct 7744 CCAGTAAGTGTTTTGACAAAGATCTGCATT 7715 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 7240 ACTAAATGGAGCGTGGACTCTTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 7181 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 |||||||| ||||||||||| | | || || |||||||| || || || || || ||| Sbjct 7180 AGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGA 7121 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || || || ||||| || || || ||| | ||| |||||||| || || || || Sbjct 7120 ATTTTAGCCTTAACATTCTCTATTGTGTCAGATGCTTCAACTTCCAAGGTAATGGTTTTT 7061 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || |||||||| ||||||||| Sbjct 7060 CCAGTAAGTGTTTTTACAAAGATCTGCATT 7031 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || || || |||||||| || |||||||| || ||| |||| || |||||| Sbjct 8182 ACTAAATGGAGTGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTTCTTCCATCTTCT 8123 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || ||||| ||||||||||| | | || || |||||||| || || || || || ||| Sbjct 8122 AGCTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGA 8063 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || || || ||||| || || || ||| | ||| |||||||| || || || || Sbjct 8062 ATTTTAGCCTTAACATTCTCTATTGTGTCAGATGCTTCAACTTCCAAGGTGATGGTTTTT 8003 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | || |||||||| ||||||||| Sbjct 8002 CCAGTAAGTGTTTTTACAAAGATCTGCATT 7973 >seq129 Length=1828789 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||| || ||||||||||| || ||| | | || ||||| | ||| ||||||||||| | Sbjct 1158785 CTTTTTGAATATTATAATCTGACAGAGTACGTCCATCTTCCAATTGCTTTCCAGCAAAAA 1158726 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | || | ||| ||||| || || |||||||| ||||| || || || ||||||||||||| Sbjct 1158725 TAAGACGTTGCTGATCAGGTGGAATTCCTTCTTTATCCTGGATTTTAGCTTTTACATTTT 1158666 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 |||| ||||| | ||||||||| | || || || || || ||||| || || |||| Sbjct 1158665 CAATAGTATCTGATGCTTCTACTTCAAGGGTGATGGTTTTACCAGTCAAAGTTTTCACAA 1158606 Query 82801 ATATCTGCAT 82810 |||||||||| Sbjct 1158605 ATATCTGCAT 1158596 >seq1081 Length=102446 Score = 147 bits (162), Expect = 4e-30 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| ||||| || |||||||| | |||||||| ||||| ||||||||||| ||| Sbjct 19917 CCACCTCTTAAACGTAGCACTAAGTGTAATGTAGATTCCTTCTGAATATTATAATCTGAT 19976 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | ||||||| || |||| |||||||||||||||||||| ||||||||||||||| || Sbjct 19977 AAAGTTCTACCATCCTCTAATTGTTTTCCAGCAAAGATTAATCTTTGTTGATCTGGTGGA 20036 Query 82704 ATTCCT 82709 |||||| Sbjct 20037 ATTCCT 20042 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||| ||||||||||| |||||||| |||||||| || ||||| | || || || Sbjct 20401 CCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCGATAGTATCTGATGCCTCGACCTCA 20460 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||| || ||||||||||| | ||||| |||||||||||||| Sbjct 20461 AGAGTGATAGTCTTGCCTGTTAGAGTCTTCACAAATATCTGCAT 20504 >seq51 Length=996734 Score = 116 bits (128), Expect = 7e-21 Identities = 277/411 (67%), Gaps = 17/411 (4%) Strand=Plus/Minus Query 143781 TCTAGAATAAAAATACTGATAGGTATAACTGGCAGCGTAGCTACCGTTAAGTTACCTAAT 143840 ||||||| ||||||||| || ||| ||||| ||||| || || |||| || || | Sbjct 186103 TCTAGAAAAAAAATACTAATTGGTTGTACTGGTAGCGTTGCAACAATTAAATTGCCACAA 186044 Query 143841 CTAGTAAAAGAATTAACTCGTTTAGAA-AATATAGAATTAAGAATAGTCGCTACAGAAAA 143899 ||||| | | ||| | |||| ||| | || |||| |||| | || ||||| Sbjct 186043 TTAGTAGAGAAGTTATGGC----AGAATAATTTGGATGTAAGGGTAGTAGTCACTGAAAA 185988 Query 143900 TGCTATGAAATTTACAGACCAAAAAA-------CTATAGGTATTCCTAT-TTATACAGAT 143951 |||| | |||| | || || | || ||| |||| | |||| | || Sbjct 185987 GGCTAA-ACATTTCCTGAAAGAAGCAGAACTGCCTCCAGGAATTCAAGTATTAT-CTGAC 185930 Query 143952 AAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCAGTCTTGCATATAGAACTTAGG 144011 | | || ||| | ||||| || | | | |||||| || || ||||| || || || Sbjct 185929 ACTGTAGAATGGGCAGCTTGGCAAGATAGAGGCGATCCTGTATTACATATTGATCT-AGT 185871 Query 144012 AGA-TGGGCTGATGTTTTTATTATAGCGCCCTTAACAGCAAATACGTTAGCAAAAATAGC 144070 | | ||||||||| | ||| | || || || || || ||||| | | |||||||| Sbjct 185870 AAAGTGGGCTGATTTATTTTTAATCGCTCCACTAGATGCCAATACCCTTGGTAAAATAGC 185811 Query 144071 CAATGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACC 144130 || ||| |||||||||||| | |||| | | | | | | ||||||||| | || || Sbjct 185810 CAGTGGCATATGCGATAATATCTTAACTTGTGTCGCACGTGCCTGGGATCCATTGAAGCC 185751 Query 144131 TCTTATTTTTTGCCCCGCTATGAATACCCTTATGTGGGAACATCCTATTAC 144181 | | |||||||| ||||| |||||||| ||||||||||||||| |||| Sbjct 185750 TTTGATTTTTTGTCCCGCAATGAATACAAAAATGTGGGAACATCCTGTTAC 185700 >seq317 Length=3049029 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 198514 TAGGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATAT 198573 ||||||| ||||||||||| || || | ||||||| | ||| ||||||| ||||| Sbjct 883932 TAGGTTGCATGTGGTCTATCTGTGGTGTCCATGATCATGGTTGGCCAGAAAGAGATATAT 883873 Query 198574 TTGGGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTTGCTGCAT 198633 ||||||| |||||||||||||||||| | || | ||| ||||||| ||||||| | || Sbjct 883872 TTGGGAAAATAAGATATATGAATTATAATGGATGTAAACGAAAATTTAATGTTGCCGAAT 883813 Query 198634 TT 198635 || Sbjct 883812 TT 883811 Score = 105 bits (116), Expect = 1e-17 Identities = 172/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 198276 AATGATCCTAGAAAGTATATCTATTCTATTAAACAACTCGAAAAGGCGGAAACACATGAC 198335 || ||| | ||||| ||| | |||||| | | || | ||||| | |||||||||| Sbjct 884243 AAGGATACAAGAAAATATGTATATTCTTTAAGTCAGTTGGAAAATTCTAAAACACATGAT 884184 Query 198336 CCTCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTA 198395 | |||||||||||| |||| || ||||||| | ||||||||||||| | || ||| Sbjct 884183 GATTTATGGAATGCATGTCAAAATCAAATGATAATAACAGGAAAAATGCATGGATTCTTA 884124 Query 198396 AGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTT-GAG 198454 |||||||| ||||| || || || | |||||||| || ||| || ||||| || Sbjct 884123 AGAATGTATTGGGCAAAGAAATTATTAGAATGGACTGAAATACCTGAGATTGCTTTAGAA 884064 Query 198455 TTATAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGT 198514 | || ||| |||| ||||||||| | || || ||||| || || || || Sbjct 884063 TGGGCCAAT-TATTTAAATAATAAGTACAGTATCGATGGTTGTGATCCGAATGGTTATGT 884005 Query 198515 AGGTT 198519 ||||| Sbjct 884004 AGGTT 884000 Score = 89.7 bits (98), Expect = 1e-12 Identities = 143/200 (72%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 198029 TAACAATCCTACTTGTTA--TGCCTTGAGTAATTTATCTCCATGGTTACATTTTGGTCAT 198086 ||| |||||| |||| | || | | ||||||||||| || ||||| ||||||||| || Sbjct 884555 TAATAATCCT--TTGTCAAATGTCATCAGTAATTTATCACCTTGGTTTCATTTTGGT-AT 884499 Query 198087 GTATCTCC--ACAACGCGTTGCCTTAGAAGTATTAAAATGTATACGAGAAAACaaaaaaa 198144 | ||||| |||||| | || ||| || | ||| || | || | |||||| Sbjct 884498 G-ATCTCAGTACAACGTTGTATTTTGGAAATACAAGAATATAAAGGATTGTATAAAAAAT 884440 Query 198145 aCGTTGAAACGTTTATAGATGAAATAATTATAAGAAGAGAACTGTCGGATAATTTTTGTT 198204 |||||| | || || || || ||||| ||||||||||| ||||||||||||| Sbjct 884439 CAGTTGAATCCTTCATGGAGGAGGCTATTATTAGAAGAGAACTTAGTGATAATTTTTGTT 884380 Query 198205 ACTATAATAAACATTACGAT 198224 ||||||| || | |||||| Sbjct 884379 TCTATAATGAAAAGTACGAT 884360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981757269664501